Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra9g0015 ATGGCAGCAAAGACGGTGTGCGTGACTGGTGCTGGAGGATTCGTGGCGTCTTGGCTTGTTAAGCTTCTTCTCTCCAAAGGTTACAATGTCCATGGAACAGTGAGACAACCCGGTAGTGAGAAATATGAGCACTTACTGAAACTGGAGGGAGCTTCTGAAAACCTCACACTCTTCAAGGCAGATCTCTTGAATTACGAGTCTATTCTCTCAGCAATTGCTGGATGCACTGCGGTTTTTCATGTCGCAAGTCCTGTACCCTCAACCATTGTTCCCAACCCTCAGGTAGAAGTGATTGAACCTGCTGTGCAAGGAACCACTAACGTACTTCAAGCTTGTCTTGAAACTAAAGTACAACGAGTTGTCTATGTGTCATCGGTGACTGCTATTGGCATTGGCCCAAATATACCTAAAGATAAAGTGATTGATGAGTCCTATTGGTCTGATAAAGATTACTGCAAAAAAACTCAGAACTGGTACTGTTATTCAAAGACAGAGGCAGAGGAGCAGGCCCTGGACTTTGGAAAAAGAACTGGCCTTGATGTGGTAAGCATTTGTCCTTCCATTGTGTGGGGGCCAATTTTGCAGTCAACCACTGTCAATGCTAGTAGCTTGGTTCTCCCCAAACTTTTGAAAGGTGGTGACTCATTTGAAAATAAGACCCGTTGGATAGTCGATGTACGGGATGTAGTTGATGCAATACTTTTGGTGTACGAGAAGCCTGAGGCAGAGCAGAGATACATATGCACTGCACACACCATCAAAACACGGGATTTGGTAGAGAAACTGAAGAGTATATATCCAAGCTACAAGTACCCTTCCAACTTCATTGCCGGCAGCTTCACTGAGGTGGATGATTACTTAAGGTTCAGCTCAGAGAAACTGGAAAGGTTGGGTTGGAAATACAGGTCGCTGGAGGAAACACTCATTGATTCTGTCGAGAGCTATCGAGAGGCTGGGCTCCTGCAATTCGAATAA 975 0.4523 MAAKTVCVTGAGGFVASWLVKLLLSKGYNVHGTVRQPGSEKYEHLLKLEGASENLTLFKADLLNYESILSAIAGCTAVFHVASPVPSTIVPNPQVEVIEPAVQGTTNVLQACLETKVQRVVYVSSVTAIGIGPNIPKDKVIDESYWSDKDYCKKTQNWYCYSKTEAEEQALDFGKRTGLDVVSICPSIVWGPILQSTTVNASSLVLPKLLKGGDSFENKTRWIVDVRDVVDAILLVYEKPEAEQRYICTAHTIKTRDLVEKLKSIYPSYKYPSNFIAGSFTEVDDYLRFSSEKLERLGWKYRSLEETLIDSVESYREAGLLQFE* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra9g0015 324 CDD FR_SDR_e 6 299 - -
Vra9g0015 324 Pfam NAD dependent epimerase/dehydratase family 6 243 IPR001509 -
Vra9g0015 324 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 321 - -
Vra9g0015 324 Gene3D - 1 324 - -
Vra9g0015 324 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 4 321 - -
Vra9g0015 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 320 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra9g0015 Vra-Chr9 135054 139272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra9g0015 6 321 Monolignol Biosynthesis Gene Families AT2G33590 61.514 2.03e-138 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra9g0015 - - gmx:100784817 522.316