Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2789 ATGAAACGTACGCGCAGAGGCAATGCCGATGCCGATGAGAATGCCGACGGCGAGGGAGTTTCCAAGAAGAAAGCGGCGCGCGAGCAGAACCCCGCCACTCGCAGGGTCATACGCTCCCAGTTCCTCAAACTCAAGACTCTCATCAGCGAGAAAAAAGATGATTTGATGAACACGGAGTCCGACAAATTCGACAACATTTTGGGCGAGTTCGACAAGTTACACGACCAAGTTGAGAAGCCAAGAGAGCAGGTTGCAGACGCAGAGGCACTGTTGGATCTGACGCGCACTCTCGTAGGATCTGTTAGGAGTTTGGCGAACGAGGGTGTCACCCCTTCACAATTTGTTTCCTCTTTGCTCATACGCTATGGCCAAGGTCAAGGCCAAGATTCAATCGATTGGCAGAAACTCGGCATTGCGGTGTCCCCAATATTCCTCTCCGTTCATGGCTCTTCTACCATGCTTGGACCTATGGACAACGAAATCAAGAAACGAAAAATCGTAGTGCGCAAACAACGTGATGCTCGCCCAGTCGCAACTACTAGACCTGAACAGCTTAATGATGCTGGTGCGGTGGAGAAAACTGATACTGACAAAAACATGGCAACGATGTTTAACATCTTGAGGAGGACAAAACGTGCACGACTTGAAAATTTAATTATCAACAGAAAGTCTTTTGCTCAGACCGTGGAAAATTTGTTTTCTCTGTCATTCCTTGTTAAAGACGGTCGTGCTGAGATCAGTCTCGATGAAAATCGTTTGCACTATGTTTCTCCTAAAAATGCTCCAGCTGCTAACTTAGTATCATCAAAAGAAGTTTCTTATAGTCATTTTGTATTCAGATATGATTACCAAGATTGGAAGCTTATGAAAGATGTTGTGCCGGAAGGGGAAGAGTTGATGCCACATCGGGTTCAATGTGCTACTGTTGCTTACCCTCGGGAAAGGATGGGTGTGGACGATTCCCAACCTGTTTTAGCTTTAACACCTATCAGGAAGCTATCGCGGAATCGAGGACTGGTTGTNCAGGAGGAAAGTGTTGTAGAAGAAACTCCTGAATGTGACGAAGAAAATGTTTCCAGAGAAGGGGCTATTCGGAGGTGTAAGCGTAAACTTCATGAAGAAATAGCACATTAG 1134 0.4612 MKRTRRGNADADENADGEGVSKKKAAREQNPATRRVIRSQFLKLKTLISEKKDDLMNTESDKFDNILGEFDKLHDQVEKPREQVADAEALLDLTRTLVGSVRSLANEGVTPSQFVSSLLIRYGQGQGQDSIDWQKLGIAVSPIFLSVHGSSTMLGPMDNEIKKRKIVVRKQRDARPVATTRPEQLNDAGAVEKTDTDKNMATMFNILRRTKRARLENLIINRKSFAQTVENLFSLSFLVKDGRAEISLDENRLHYVSPKNAPAANLVSSKEVSYSHFVFRYDYQDWKLMKDVVPEGEELMPHRVQCATVAYPRERMGVDDSQPVLALTPIRKLSRNRGLVVQEESVVEETPECDEENVSREGAIRRCKRKLHEEIAH* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2789 377 PANTHER UNCHARACTERIZED 5 360 IPR027786 GO:0005634|GO:0006281|GO:0030915
Vra8g2789 377 MobiDBLite consensus disorder prediction 1 33 - -
Vra8g2789 377 MobiDBLite consensus disorder prediction 1 31 - -
Vra8g2789 377 Pfam Nse4 C-terminal 214 299 IPR014854 -
Vra8g2789 377 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 5 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2789 Vra-Chr8 45435317 45437809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2789 34 371 Non-SMC Element family AT1G51130 52.299 7.04e-120 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2789 K22825 - gmx:100792117 564.688