Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2769 ATGAATAAAAAAGAAAAAATAGACAGAAAGTCGTTATATAGTGGGCAAGGAAACATCACCTGTACAAGCGCATGCACACTCATTTTCAGAATCTCTTTGAATTTCTTCACGACAATGGCCATGAATTCGAGCAAGTCCAACGACTTTAGCACCATCCTCTTCCCTCTCTCGGCTTCAAACGCAGTCCAAAAAAGCGAAGCTTTAACGGTGAAAGGAATGAGCCAACTTGGGCTGAGCCAAAGAGTAAAGAGTCTCAGAAAAATGTCATTGGCCACGAAAAGAAGAGCAGTGATGTTTCATGGCAAGGGCAAAGAGGTTCTGAGGGCTCAGTTTTCGGATCTGTCACCAACTTCAGTAGGTGTTGATGGTGGCGACACGGAGAGCATCTTAAGAGCGAGTCAGATAGTGAGAGAAAAACTGGAAAAAGCAGTTTGCAACACTCGCACTAATAAGAAAGCCAAGGAAATGCTGCAAGCAAAACTTCTATTAGCATTCGCTTCTGAAAGTGATGTTGCTGTTGGTGAAACTTCCTCAACACCCCAAAGGGGAAGTTTTTTGAACCATTTTGCTTATCCCTTTCCCAACCGTTTTTGGCAGGCAGACACGGAGGTTGATAAAAGCATCAGCCTTTGTGCAACTCCATTGAGGGTTTGTTTTCCCGACGAAAGCGTTTATGGTAGCAGGGACAATGAGAGCGAATACGACGGTCGGATGCACAGCAATCCGTACAAGAAGAACGGGCCGTACACGTGTCCGAAGTGCGGGTGCGTGTTTGAGACGTCGCAGCGGTTTGCGGCGCACGTGAGTTCTATGCACTATAGGTACGAGACGAAGAGTGAGAGGAAGAAGAGAATGATGGCGAAAATCCGAAGGAGGAGTCTGCGTCTTGAATGGGAAAACGGTGACGATGGTCAGAGAAGAAATAGCAGTGTGTTTGGTTTTGCAGGAAACAATAGCAACGTTGCTCCTGCTCAAGTGAAGATTGAAACTGAGAGTGTTGTGAGGCTTCAGCTTGCTCCTCCTCCTGGCTGGCCAAAAATAACTGAAGCTGTCAGAATAAAATCGGAGCCATTATACAATTGA 1083 0.4589 MNKKEKIDRKSLYSGQGNITCTSACTLIFRISLNFFTTMAMNSSKSNDFSTILFPLSASNAVQKSEALTVKGMSQLGLSQRVKSLRKMSLATKRRAVMFHGKGKEVLRAQFSDLSPTSVGVDGGDTESILRASQIVREKLEKAVCNTRTNKKAKEMLQAKLLLAFASESDVAVGETSSTPQRGSFLNHFAYPFPNRFWQADTEVDKSISLCATPLRVCFPDESVYGSRDNESEYDGRMHSNPYKKNGPYTCPKCGCVFETSQRFAAHVSSMHYRYETKSERKKRMMAKIRRRSLRLEWENGDDGQRRNSSVFGFAGNNSNVAPAQVKIETESVVRLQLAPPPGWPKITEAVRIKSEPLYN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2769 360 ProSiteProfiles Zinc finger C2H2 type domain profile. 249 277 IPR013087 -
Vra8g2769 360 ProSitePatterns Zinc finger C2H2 type domain signature. 251 272 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2769 228 306 C2H2 Transcription Factor Family AT2G18490 50.633 1.28e-20 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vra8g2769 None None None