Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2762 ATGGTATCAGCTACAATTAGGCGAATTGTGTCACCCTGTTGGAGACCATCTGATACGGGTGAAATTTCTGGTAGGCATGGAGATTCAAGTGGGCGTGTTGATGGTTTGTTGTGGTACAAAGATTCTGGAAGACATGCGCATGGTGAATTCTCAATGGCAGTTATTCAAGCAAACAAATTGTTGGAGGATCAAAGCCAACTTGAATCTGGCCCCTTGAGCTTAACTGAGGGAACTCCTGTTGCAACTTTTGTTGGTATATACGATGGTCATGGAGGTCCAGAAGCTTCCCGGTTTGTCAATGACAGTCTCTTTAAAAATATCAAGACAGAATTTTCTTCTGAAAATGATGGAATGTCAGCTGATGTTGTCCATAAAGCATTCATGGCAACTGAAGAAGAATTTCTTTCTCTGGTAGAGAAGCAATGGCTGCATAAGCCCCCTCTAGCGTCAGTTGGATCTTGCTGCTTGATAGGCATAATATGCTGTGGGGAGCTCTATATTGGAAATGCAGGAGATTCTCGAGCAGTACTAGGTAGAACGGATGAGGCTACAAAAGAGATTAAAGCTATTCAACTATCCGAGGAGCACAATGCTAGCATAGTATCTGTCAGAGAAGAGTTGCGCTCATTGCATCCTGATGATCCGCAGATAGTGGTTATGAAGCACCAGGTCTGGCGCGTGAAGGGTCTGATTCAGATTTCAAGATCCATTGGTGATGCCTACCTAAAGAAGGTAGAGTTTAATAGAGCACCATTATTGCCAAAATTTCGACTCCCGGAACCCTTTGAGCAGCCAATCCTTAAAGCTGAACCAGCAATACTGGTACAGAAATTGTGTCCTCAAGATCAGTTTCTCATATTCGCATCAGATGGGTTATGGGAGCATCTGAGCAGTCAAGAAGCAGTCGACATTGTCCAAAACTGTCCACGCAATGGAGTGGCAAAGAAACTTGTGAAAACAGCACTTTGTGAAGCTGCGAAGAAAAGAGAAACGAGATACTCAGACTTGAAAAAGATTGACAGAGGGGTGAGGAGACATTTCCATGATGACATCACTGTTATAGTTTTGTATCTTGATTCAAATTTTTTGGCCCGTGCCAATTCTCGTGTACCCTTGGTTTCTATCAAAGGAGGTGGTGAAAGTGGTTATGGTATTGGAATTATAGATGCCTAG 1173 0.4314 MVSATIRRIVSPCWRPSDTGEISGRHGDSSGRVDGLLWYKDSGRHAHGEFSMAVIQANKLLEDQSQLESGPLSLTEGTPVATFVGIYDGHGGPEASRFVNDSLFKNIKTEFSSENDGMSADVVHKAFMATEEEFLSLVEKQWLHKPPLASVGSCCLIGIICCGELYIGNAGDSRAVLGRTDEATKEIKAIQLSEEHNASIVSVREELRSLHPDDPQIVVMKHQVWRVKGLIQISRSIGDAYLKKVEFNRAPLLPKFRLPEPFEQPILKAEPAILVQKLCPQDQFLIFASDGLWEHLSSQEAVDIVQNCPRNGVAKKLVKTALCEAAKKRETRYSDLKKIDRGVRRHFHDDITVIVLYLDSNFLARANSRVPLVSIKGGGESGYGIGIIDA* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2762 390 ProSiteProfiles PPM-type phosphatase domain profile. 46 358 IPR001932 -
Vra8g2762 390 SUPERFAMILY PP2C-like 58 359 IPR036457 -
Vra8g2762 390 Pfam Protein phosphatase 2C 76 331 IPR001932 -
Vra8g2762 390 CDD PP2Cc 50 358 IPR001932 -
Vra8g2762 390 Gene3D - 38 368 IPR036457 -
Vra8g2762 390 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 8 380 - -
Vra8g2762 390 PANTHER ALPHABET, ISOFORM E-RELATED 8 380 - -
Vra8g2762 390 SMART PP2C_4 41 356 IPR001932 -
Vra8g2762 390 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2762 Vra-Chr8 45206350 45212109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2762 3 380 PP2C-type Phosphatase Gene Family AT3G12620 72.823 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2762 K01102 - gmx:100807559 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2762 8 45206350 45212109 Vra8g2762 8 45206350 45212109 ECH