Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2733 ATGATCTCAAACTCCGACCCTGTAGAACCACTCACTGCGGCCGCGGCCACCTCCGCGGTCGCGGTAACCGCTTCGTCTTCCGCTGAAGGTCAGCCTGCACCGCCGGCGACGCCAAACATTGTGATGTCCTCCAAGGATCACGATTCTCTCTTCAGCGGTGGCGGCATCAGATTATTTTTGTCTAGCTTTCTCTCTGGAAGTCGAAGTGGAAGGTTCAGCTATGGATATTCCAGTTTCAAGGGTAAAAGGTCATTAATGGAGGATTTCTTTGAGACCACCATATCAGAGGTCGATGGTCAGATGGTTGCATTTTTTGGTGTTTTTGATGGTCATGGAGGTTCCCGGACTGCAGAATATTTGAAAAACAATCTATTTAAGAATTTGAGTAGCCATCCTGACTTTATCAAAGACACAAAGACTGCTATAGTTGAAGCATTTAAACAGACAGATATCGACTACCTCAATGAGGAAAAGGGCCATCAAAGAGATGCTGGGTCAACTGCATCAACAGCTATGTTGTTGGGGGACCGAATTGTTGTTGCAAATGTTGGTGATTCCAGAGTAGTTGCAAGTAGAGCTGGTTCAGCTATTCCTTTGTCTATTGATCACAAGCCCGATAGATCTGATGAACGTCAAAGGATTGAAAAGGCTGGGGGATTTATAATCTGGGCTGGAACATGGAGGGTCGGTGGTGTTCTTGCTGTGTCCCGTGCATTTGGCGACAAACTTCTTAAGCCTTATGTGGTTGCTGACCCTGAAATTCAGGAGGAAGAAATTGACGGTGTAGATTTTATTATAATTGCTAGTGATGGCCTTTGGAATGTCATATCAAACAAGGAGGCCGTGTCGTTAGTACAGAATATCACAGATGCAGAAGTGGCATCCAGAGAACTGATAAAAGAAGCTTATGCACGGGGAAGCTCTGATAACATCACTAGTGTTGTTGTTCGATTTGATATATCCTGA 966 0.4513 MISNSDPVEPLTAAAATSAVAVTASSSAEGQPAPPATPNIVMSSKDHDSLFSGGGIRLFLSSFLSGSRSGRFSYGYSSFKGKRSLMEDFFETTISEVDGQMVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDIDYLNEEKGHQRDAGSTASTAMLLGDRIVVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEKAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYARGSSDNITSVVVRFDIS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2733 321 PANTHER ALPHABET, ISOFORM E-RELATED 59 321 - -
Vra8g2733 321 ProSitePatterns PPM-type phosphatase domain signature. 104 112 IPR000222 GO:0043169
Vra8g2733 321 Gene3D - 67 320 IPR036457 -
Vra8g2733 321 Pfam Protein phosphatase 2C 75 311 IPR001932 -
Vra8g2733 321 SUPERFAMILY PP2C-like 64 319 IPR036457 -
Vra8g2733 321 ProSiteProfiles PPM-type phosphatase domain profile. 73 318 IPR001932 -
Vra8g2733 321 CDD PP2Cc 72 318 IPR001932 -
Vra8g2733 321 SMART PP2C_4 62 316 IPR001932 -
Vra8g2733 321 PANTHER PROTEIN PHOSPHATASE 2C 11-RELATED 59 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2733 Vra-Chr8 44998540 45003239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2733 40 321 PP2C-type Phosphatase Gene Family AT1G43900 72.695 2.27e-154 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2733 K17506 - gmx:100776867 522.702