Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2698 ATGGAAGAGATGTCGGGTTCAGCAACGGCAATAAATTCTTCCAATATTGGATTTCAGCTATTGAAGAAACAAGGTTGGAAAGAAGGGACTGGTCTTGGAGTATCTGAGCAGGGTAGATTAGAACCTGTGGAAACTTATGTAAAGAATAATAAACGAGGTTTGGGAGCAGAAAAAGGGAAGAAAAAGGCCGTGAAAGTGAAACCGGATCATAGCGATTCCTCTAAAGGGACCAGTGAACAGGATCATTTACCTAAAAAGAAAAGCAAAACATTGTCTAAACGGATGAGAAAGATGCAGGAGTTGGAGAAGAAAATGCAAGAGAAGGAGTTTGAACGAGCTTTTTTCAGAGAGTTCTGGCCAGAAAATGTATAA 372 0.4005 MEEMSGSATAINSSNIGFQLLKKQGWKEGTGLGVSEQGRLEPVETYVKNNKRGLGAEKGKKKAVKVKPDHSDSSKGTSEQDHLPKKKSKTLSKRMRKMQELEKKMQEKEFERAFFREFWPENV* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2698 123 Coils Coil 88 111 - -
Vra8g2698 123 MobiDBLite consensus disorder prediction 48 101 - -
Vra8g2698 123 PANTHER BAT4 PROTEIN-RELATED 4 123 IPR039146 -
Vra8g2698 123 Pfam G-patch domain 14 57 IPR000467 GO:0003676
Vra8g2698 123 MobiDBLite consensus disorder prediction 51 86 - -
Vra8g2698 123 ProSiteProfiles G-patch domain profile. 13 59 IPR000467 GO:0003676
Vra8g2698 123 SMART G-patch_5 11 57 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2698 Vra-Chr8 44729483 44731970 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2698 11 55 C2H2 Transcription Factor Family AT5G26610 53.333 5.52e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2698 - - gmx:100812494 184.496