Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2658 ATGGCCATGATGGTGACGGAGGGCAACGACAGCTGCGGAAGCGGAGTGCAGCACCATAGGACGTCCTCCTCCTCCTCTTCGCCGGCGCAAACTCGTCAGCAGCGCCACAAGGTCGAAGTCTACAATGAGATTCTTCGCCGCTTGAAAGATTCCGGCCACGAAGAGGCTATGCAACCTGGCTTCAACGATCAGCTTTGGGCTCACTTCAATCGTCTTCCCACACGGTACGCGCTGGATGTGAATGTGGAAAGGGCGGCTGATGTTCTTATGCACAAGAGGTTATTGCAGTTGGCACATGATCCTGCTAATAGGCCTTCAATTGAAGTTAGATTAGTTCAGGTTCATCCCATATCTGATGGAAACTCAGCCGATGCTTCTGAATTGGATGATCCTGGGACAGAATCTGGTCAAAGTTCTTCAAAGTACTCTAACAGACAGAGTATACATCCACCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCATTGGCTCTTGAAGCAAATAGTTCTGAAGACATAGAGGAGGAACAATCTGTACACGCCAATGTTCAATATTCACGACCCATGCATGAAATCACCATCTCAACAGATGACAAGCCAAAGCTTCTTAGCCAGTTAACTGCTTTGCTTGCTGAGATTGGACTGAACATCCAAGAAGCACACGCCTTTTCCACAACCGATGGTTACTCATTAGATGTATTTGTTGTTGAAGGATGGCCCTACGAGGAAACAGAAAAGCTGAAAGCAGCTTTGGAAAGAGAAGTCTTGAAGAAGATTGAGGTGAGGTCCAGTCCGCAATCTGTATCTTCTGTTGATGAGCCTGATCAACCAAAGATGAAAACTGAACTGGATCATTTGACAATACCAAATGATGGGACAGATGTTTGGGAAATAGATCCTAAACATTTGAAATATGGAACTCAAATTGCATCTGGGTCATATGGTGAACTATTTAAAGGTGTATACTGTAGCCAGGAAGTAGCGATCAAAGTTCTCAAGCCTGAACATGTAAATTCAGAATTGCAGAAAGAGTTTGCACAAGAAGTCTACATCATGAGAAAGGTTCGACACAAGAATGTTGTACAATTCATAGGAGCATGTACCAAGCCCCCACGTTTATGCATAGTGACAGAATTTATGTCAGGTGGAAGTGTGTATGACTACCTACATAAGCAGAGGGGCTTTTTTAAATTTCCTACTCTGCTTAAAGTCGCAATTGATATTTCTAAAGGGATGAACTACTTGCACCAACATAACATAATCCATAGAGATTTGAAGGCTGCCAACCTTTTGATGGACGAAAATTGTGTTGTAAAGGTTGCTGATTTTGGGGTTGCTAGAGTTAAAGCTCAGTCTGGTGTTATGACAGCAGAAACTGGAACATATAGATGGATGGCTCCTGAGGTTATAGAACACAAGCCGTATGATCACAAGGCTGATGTATTTAGTTTTGGAATTGTTTTATGGGAGTTGCTCACTGGAAAGCTTCCATACGAATATTTAACCCCCCTTCAGGCAGCTATAGGAGTGGTTCAAAAGGGTTTGCGACCCACCATCCCCAAGAACACTCATCCAAAATTTGTTGAACTTCTTGAGAGATCCTGGCAGCAAGATCCAACATTGAGACCCGACTTCTCTGAAATTATCGACATCCTGCAGCAATTGGTGAAGGAGGTTGGAGATGGAGAAGAGCGGCACAAAGAAAAATCTGGAGGACTTCTGTCAGTCCTGAGACGAGGACATCACTAA 1749 0.4397 MAMMVTEGNDSCGSGVQHHRTSSSSSSPAQTRQQRHKVEVYNEILRRLKDSGHEEAMQPGFNDQLWAHFNRLPTRYALDVNVERAADVLMHKRLLQLAHDPANRPSIEVRLVQVHPISDGNSADASELDDPGTESGQSSSKYSNRQSIHPPPAFGSSPNLEALALEANSSEDIEEEQSVHANVQYSRPMHEITISTDDKPKLLSQLTALLAEIGLNIQEAHAFSTTDGYSLDVFVVEGWPYEETEKLKAALEREVLKKIEVRSSPQSVSSVDEPDQPKMKTELDHLTIPNDGTDVWEIDPKHLKYGTQIASGSYGELFKGVYCSQEVAIKVLKPEHVNSELQKEFAQEVYIMRKVRHKNVVQFIGACTKPPRLCIVTEFMSGGSVYDYLHKQRGFFKFPTLLKVAIDISKGMNYLHQHNIIHRDLKAANLLMDENCVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLERSWQQDPTLRPDFSEIIDILQQLVKEVGDGEERHKEKSGGLLSVLRRGHH* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2658 582 MobiDBLite consensus disorder prediction 561 575 - -
Vra8g2658 582 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 21 564 - -
Vra8g2658 582 MobiDBLite consensus disorder prediction 119 158 - -
Vra8g2658 582 ProSiteProfiles Protein kinase domain profile. 303 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g2658 582 MobiDBLite consensus disorder prediction 131 153 - -
Vra8g2658 582 CDD STKc_MAP3K-like 309 552 - -
Vra8g2658 582 Gene3D Transferase(Phosphotransferase) domain 1 382 572 - -
Vra8g2658 582 MobiDBLite consensus disorder prediction 561 582 - -
Vra8g2658 582 Gene3D - 188 261 - -
Vra8g2658 582 ProSiteProfiles ACT domain profile. 191 266 IPR002912 -
Vra8g2658 582 SUPERFAMILY ACT-like 189 253 IPR045865 -
Vra8g2658 582 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 21 564 - -
Vra8g2658 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Vra8g2658 582 MobiDBLite consensus disorder prediction 10 35 - -
Vra8g2658 582 MobiDBLite consensus disorder prediction 1 36 - -
Vra8g2658 582 Pfam Protein tyrosine and serine/threonine kinase 303 551 IPR001245 GO:0004672|GO:0006468
Vra8g2658 582 PRINTS Tyrosine kinase catalytic domain signature 377 390 IPR001245 GO:0004672|GO:0006468
Vra8g2658 582 PRINTS Tyrosine kinase catalytic domain signature 414 432 IPR001245 GO:0004672|GO:0006468
Vra8g2658 582 PRINTS Tyrosine kinase catalytic domain signature 460 470 IPR001245 GO:0004672|GO:0006468
Vra8g2658 582 PRINTS Tyrosine kinase catalytic domain signature 479 501 IPR001245 GO:0004672|GO:0006468
Vra8g2658 582 PRINTS Tyrosine kinase catalytic domain signature 523 545 IPR001245 GO:0004672|GO:0006468
Vra8g2658 582 CDD ACT_TyrKc 189 256 - -
Vra8g2658 582 SUPERFAMILY Protein kinase-like (PK-like) 287 552 IPR011009 -
Vra8g2658 582 SMART serkin_6 303 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g2658 582 Gene3D Phosphorylase Kinase; domain 1 293 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2658 Vra-Chr8 44462594 44475305 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2658 7 581 MAP Kinase Kinase Kinase AT4G35780 64.696 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vra8g2658 PK_Tyr_Ser-Thr 6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2658 - - gmx:100805180 1093.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2658 8 44462594 44475305 Vra8g2658 8 44462594 44475305 ECH