Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2640 ATGTTCTCGGAGTTGATGAACTTATTGAGGGCCTGCTTTCGGCCGGGTTCCGAAGGATTTTCTCGCACAGGTTCGGATGCCGGAGGTAGACAGGATGGACTATTGTGGTATAAGGACTCAGGGCAGCACTTGAATGGTGAATTTTCAATGGCTGTGATCCAAGCCAATAACTTGCTGGAAGATCAAAGCCAGATTGAATCAGGCAGTTTGAGCTCCAATGAATCTGGCCCTTATGGTACTTTCGTCGGTATCTATGATGGCCATGGAGGGCCCGAGACATCGCGGTTTATCAATGATCACCTCTTTCACCATCTCAAGAAATTTACTTCAGAGCAACAATCAATGTCAGTAGATGTGATTCGCAAGGCATTCCAAGCAACGGAAGAGGGGTTTATGTCAGTGGTTGCCAATCAGTGGTCCCTGTCGCCACAAATTGCAGCTGTTGGCTCATGTTGTCTTGTTGGTGTTATTTGTAACGGAACCCTTTATATAGCAAACCTAGGGGATTCCCGGGCAGTTTTAGGAAGAGCGGTGAAGGCAACTGGTGAGGTTTTAGCCATGCAATTATCGGCAGAGCACAATGCATCAATAGAGTCTATAAGGGAGGAGCTGCATTCTTTACATCCTGATGATCCAAATATTGTGGTTTTAAAGCATAGTGTATGGCGTGTGAAGGGCCTTATTCAAGTTTCTAAATCTATTGGTGATGTGTATTTGAAGAAGGCCGAGTTCAATAGGGAACCTCTATATGCTAAGTTTCGACTTCGGGAACCATTCAAGATGCCAATACTGAGCTCAGAGCCATCAATTTCTGTGCATCATTTGCAGCCAAATGATCAATTTATTATATTTGCATCAGATGGACTCTGGGAGCACCTTAGCAATCAAGAAGCAGTTGATATAGTTCAAAACAGTCCCCGCAGTGGAAGTGCAAGGAGGCTGGTGAAAGCTGCACTTCAAGAAGCTGCAAAGAAAAGAGAAATGAGATATTCAGATTTAAAGAAAATAGATCGTGGTGTTCGCCGTCATTTCCATGATGATACCACAGTGGTTGTTGTGTATCTTGACTCAAATCTTGTGAGTAGGACAAGCACTGCGAAGTTCCCTGGTATTTCTGTGAGAGGGGGTGGTATTAACCTGCCTCATAACACACTGGCACCTTGTACCACACCAACAGAGATTAGTGGTACCTGA 1194 0.4464 MFSELMNLLRACFRPGSEGFSRTGSDAGGRQDGLLWYKDSGQHLNGEFSMAVIQANNLLEDQSQIESGSLSSNESGPYGTFVGIYDGHGGPETSRFINDHLFHHLKKFTSEQQSMSVDVIRKAFQATEEGFMSVVANQWSLSPQIAAVGSCCLVGVICNGTLYIANLGDSRAVLGRAVKATGEVLAMQLSAEHNASIESIREELHSLHPDDPNIVVLKHSVWRVKGLIQVSKSIGDVYLKKAEFNREPLYAKFRLREPFKMPILSSEPSISVHHLQPNDQFIIFASDGLWEHLSNQEAVDIVQNSPRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDTTVVVVYLDSNLVSRTSTAKFPGISVRGGGINLPHNTLAPCTTPTEISGT* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2640 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Vra8g2640 397 Pfam Protein phosphatase 2C 71 324 IPR001932 -
Vra8g2640 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Vra8g2640 397 PANTHER ALPHABET, ISOFORM E-RELATED 6 387 - -
Vra8g2640 397 Gene3D - 37 367 IPR036457 -
Vra8g2640 397 SMART PP2C_4 39 353 IPR001932 -
Vra8g2640 397 CDD PP2Cc 48 355 IPR001932 -
Vra8g2640 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Vra8g2640 397 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 6 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2640 Vra-Chr8 44301689 44306276 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2640 1 396 PP2C-type Phosphatase Gene Family AT4G38520 74.495 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2640 - K01102 gmx:100790374 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2640 8 44301689 44306276 Vra8g2640 8 44301689 44306276 ECH