Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2620 ATGGAGCTTTCTGCCTTCCCCACCTTCAAAGCAGTTTCTAATGCTTCCTTAATCCCATTTTCTTCTCATCAACTCTGCAGCCGCTGCTCCTTTCCTCTTCGTCGTAGCGATTATGGCTTCTGTTGGATTCCCGAGCCAAAACCGTTTGATCGGATCAAGATGTGCTCGGAGAAGAAATGTTTGTCGTCGAACGGTTACGGTGGAACCGAAAACGGAGAAACAAAACCTGATTTCGTCGAAGTCATAGGCATTGGTTCTAGGAAGGACGCTATTTTTGATTTCTGCTTGAGCGCGCCGTTTCAGTTGCCTTTGCTGCGGTTTTGGAATATCCTTATGACAGAATCAGAAGAAGTGCATTTACAACAAAGATCAATTGAAGAAGAACCTCATCCAAGAGTTGTCAAAGCTCCCGTATTTTTGAAGTCATGCTCACAGACTATTGTTCTTGTGGCCAGTGCAGGATATGGCTTGTACCACACTGTTGCAGCTGATATTTTTGAAACTGTAAGGTCCAGGAATGGATTAACCGTGGCTATAGTTTTGAAGCCATTTAGATTTGAAGGGCTTAGACGGCAAAACGAGGTGAAGACCTTGATGCAGAAACTTAAGGAGAACACAAACTTACTTATTGAAATTGATATTGATGCATTGCTTGAGAAAGACTTGTTGACACTAGATGAGGCCATGAAGACTGCTAATGATGCAGTTTTGCTTGCTATTAAGGCTGTCTCTGTTCTGAAGTCTGAGATGCACAGAAAAATTATAGACAGATTGAATGGTGGGATGAAAGAGGCCAGCCCTTCAGAAATTAATAAAATGTTAGAATCCTATAAAGAAGCAGGGATTGGATTTGGAGCCGCTGCAAACATAAAAGCTTCAATTTTGCAATCTATATTTGATAGTCCTTTCCTGGGTGCTCGTTTGAAGGATCCAAATAGCATAGTTATATGCAATCTTGCCTGTTCAGGACCCATCAATGATAGTGATATAGAAATCTTTCTACGTACTTTCCGTCAAACAACAAATTACACAAATGATATTATAATATCAGCAATACATGACCCTACTGTTGAGCCCAACCTACTCATAACGACAGTGCTTACACTTGGCTGTTTAAATGTGCAACGGTCTTCCCAGAATGGTGGTATACTATCCAGACTTGCCATGCATTTTCCTCTTATTTTTAGCTTTTGGGGAAGACATAGTCAGCAAGAAGTTGGCACTGGGAAACAGACTGAAGTATTTCCGCCAGAAATGATGAGTTGTGATGATGTTGATGAAAGAACAAATCAGATCGCTTTAGATGGCATAGATAGCAATCTTGATAAAAAATGTGAGGAGTTGGAGCCAACAATGAGCAAGAACTCCAAGTTTCCTGCTTTAAGGGATTCAGGAAAAAGTGAAGATTTATTTGACACCTCTTCCAACTATAACATCCTCTATGACTCTATTACTGAAGGAGTTGCATTAGGTGACTCTGCTTTTCAAAGGGAGCAACTTGAGAACTGGAATCTAGGTCCCGGATTTGAGGTGGCAAAGAAATGGGCCCAGGAAAAAGCAGCTGATGCTACACCAATTGTTGATAATCTAAGCATCTTCCACCTTCCTGTTGGCGTGAGGCCTTCAGAAGAGTTGAAAGAAAGACTAGAAATCTCATTTATGACAAAACAGCATGAGCCTGATACTGATAATGTTGTGAAAACACAAACATTTAATGGAGGTACGTCTTCTTGGAGTGCAGCGACTGATGCTAGCTTGGAAGCAGTTATGGATTTTGCATCTTCACTTTTGAAAGGAAAGAATGCTAATAAATCAAAGACACATGGAGTACTATCTGTTCGTGCTGCGTCTATGTTGGAGGCAGAACGTGATTTCTCAAAAAAGTGGAGTCCAGTGGTGGAAATGCAATATAGGGGAGGAAGATACAAGGGACGATGCCAAGGAGGTCTACCTGAAGGAAAGGGGCGCCTTGTTCTCAGAGATGGGAGCATATATGATGGCTTATGGCGGTATGGTAAGAGATCAGGTCCGGGTACATTCTATTTCAAAAACGGAGATATGTTTCAAGGATTATGGAGAGATGATGTCATACACGGCAAGGGTTGGTTTTATTTTCGCACTGGTGATCGGTGGTTTGCAAACTTTTGGAAGGGAAAAGCTAATGGTGAGGGACGATTCTACACAAAGTCCGGCGATGCCTTCTTTGGCAATTTCAAAGATGGGTGGCGACATGGCCAGTTTCTCTGTATTAATGCGAACGGGACCAGGTACACTGAAATTTGGGATCATGGTGTTCGTGTAGATAGCAAGCATTTGGACAGATGA 2325 0.4198 MELSAFPTFKAVSNASLIPFSSHQLCSRCSFPLRRSDYGFCWIPEPKPFDRIKMCSEKKCLSSNGYGGTENGETKPDFVEVIGIGSRKDAIFDFCLSAPFQLPLLRFWNILMTESEEVHLQQRSIEEEPHPRVVKAPVFLKSCSQTIVLVASAGYGLYHTVAADIFETVRSRNGLTVAIVLKPFRFEGLRRQNEVKTLMQKLKENTNLLIEIDIDALLEKDLLTLDEAMKTANDAVLLAIKAVSVLKSEMHRKIIDRLNGGMKEASPSEINKMLESYKEAGIGFGAAANIKASILQSIFDSPFLGARLKDPNSIVICNLACSGPINDSDIEIFLRTFRQTTNYTNDIIISAIHDPTVEPNLLITTVLTLGCLNVQRSSQNGGILSRLAMHFPLIFSFWGRHSQQEVGTGKQTEVFPPEMMSCDDVDERTNQIALDGIDSNLDKKCEELEPTMSKNSKFPALRDSGKSEDLFDTSSNYNILYDSITEGVALGDSAFQREQLENWNLGPGFEVAKKWAQEKAADATPIVDNLSIFHLPVGVRPSEELKERLEISFMTKQHEPDTDNVVKTQTFNGGTSSWSAATDASLEAVMDFASSLLKGKNANKSKTHGVLSVRAASMLEAERDFSKKWSPVVEMQYRGGRYKGRCQGGLPEGKGRLVLRDGSIYDGLWRYGKRSGPGTFYFKNGDMFQGLWRDDVIHGKGWFYFRTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFLCINANGTRYTEIWDHGVRVDSKHLDR* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2620 774 PRINTS Cell division protein FtsZ signature 174 195 IPR003008 GO:0005525
Vra8g2620 774 PRINTS Cell division protein FtsZ signature 268 289 IPR003008 GO:0005525
Vra8g2620 774 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 639 767 - -
Vra8g2620 774 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 1 774 - -
Vra8g2620 774 SMART morn 663 684 IPR003409 -
Vra8g2620 774 SMART morn 640 661 IPR003409 -
Vra8g2620 774 SMART morn 686 707 IPR003409 -
Vra8g2620 774 SMART morn 732 753 IPR003409 -
Vra8g2620 774 Gene3D - 713 772 - -
Vra8g2620 774 PANTHER PROTEIN ACCUMULATION AND REPLICATION OFS PROTEIN 1 774 - -
Vra8g2620 774 SUPERFAMILY Tubulin nucleotide-binding domain-like 81 244 IPR036525 -
Vra8g2620 774 Pfam MORN repeat 688 710 IPR003409 -
Vra8g2620 774 Pfam MORN repeat 665 687 IPR003409 -
Vra8g2620 774 Pfam MORN repeat 647 663 IPR003409 -
Vra8g2620 774 Pfam MORN repeat 735 746 IPR003409 -
Vra8g2620 774 Gene3D Tubulin/FtsZ, GTPase domain 116 369 IPR036525 -
Vra8g2620 774 Gene3D - 644 697 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2620 1 773 PP2C-type Phosphatase Gene Family AT1G75010 44.040 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2620 - - gsj:114371951 1315.06