Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2592 ATGGGAAAGAAAGCTCTCAGACTTCCCTCTCTTTTCAAAACCAAAGAACCACCAAGAAAGCTACACCACCACCACCACCACCACCTTCTTCACAATCATCATCCATGGCAATTCATACCCTCTTGCGGCCATTCCAAGACCCTCTCTTTCCGAGGTGGTGCCGACGATGACATCTTCAAGACAGTTAACTCCGTCTTCTTCGACCCTTCAGAGAGTGTCATCGAAACTCCCAAGTCATGGTTCACCACCTCGTCTGAATCTGCCAGCATCTCCACCGAGTCAGAAGACTACTACTGCTGCGACGGGGAGTCTCTGGAGATGTTGGTGCGTGGTGTGAGATCAGAGAGGCTTTTCTTCGAGCCTGGTGACACAAGCTCCATCTTGGAAAAGGCCAAGGCCAGTGGGTTTCCCTTCAAAGAAAGTGTGGTTCTTGCCATGGAATCAGAGGACCCTTACGAGGATTTCAAGAGATCAATGGAGGAGATGGTGGAATCTCATGGAGTAAGGGACTGGGAAGGCTTGGAGGAGCTTTTGACTTGGTATCTCAAGGTCAATGGCAGGAACAATCACGGATTCATAGTCGGTGCTTTTGTTGATTTGCTCCTTAGTTTAGCATCTTCTAACAATTCTAACTCTTGTTCTGATTCAACTGCATATTCTTCTGCTATTTCTTCTTTTGCTTCTTCCCCCTTGTGTCATGAGATTGTCGAGCATGGCATTGGGAATCATGATGCTGTAACATCTTAG 747 0.4739 MGKKALRLPSLFKTKEPPRKLHHHHHHHLLHNHHPWQFIPSCGHSKTLSFRGGADDDIFKTVNSVFFDPSESVIETPKSWFTTSSESASISTESEDYYCCDGESLEMLVRGVRSERLFFEPGDTSSILEKAKASGFPFKESVVLAMESEDPYEDFKRSMEEMVESHGVRDWEGLEELLTWYLKVNGRNNHGFIVGAFVDLLLSLASSNNSNSCSDSTAYSSAISSFASSPLCHEIVEHGIGNHDAVTS* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2592 248 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 142 205 IPR006458 -
Vra8g2592 248 Pfam Transcriptional repressor, ovate 148 204 IPR006458 -
Vra8g2592 248 PANTHER TRANSCRIPTION REPRESSOR OFP13 9 230 - -
Vra8g2592 248 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 9 230 IPR038933 GO:0045892
Vra8g2592 248 ProSiteProfiles OVATE domain profile. 144 203 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2592 Vra-Chr8 43854263 43855430 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vra8g2592 Ovate 5.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2592 - - vun:114190765 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0585 3 6436938 6438108 Vra8g2592 8 43854263 43855430 ECH
Vra8g2592 8 43854263 43855430 Vra8g2592 8 43854263 43855430 ECH