Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2587 ATGGCAATAGGTGCAGCTTCCATGGGTGTGAATGGATGGGGAGACATGAAAAGTCTCACCGTCCAGGTCATCACCGGTCGATGGTTCGTCGTCTTTGCCTCCTTTCTAATCATGGCTGCTGCCGGAGCCACCTACATGTTCGGTCTCTACTCCGGAGACATCAAAGCCACCCTTGGCTACGACCAAACCACTCTCAATCTCCTAAGTTTCTTCAAGGACATGGGCACTAACGTTGGAGTCCTCTCTGGTCTTATCAACGAGCTCACTCCACCTTGGGTGGTGCTAGCCATTGGTGCTCTGCTAAACTTCTTCGGTTACTTCATGATTTGGCTCTCAGTCACCCAGAAAATAGCCAGACCCCAAGTGTGGCAGATGTGTCTCTACATCTGCATAGGTGCTAACTCTCAGTCCTTCGCCAACACCGGTTCCCTAGTCACCTGTGTCAAGAACTTCCCTGAAAGTCGTGGTGTTGTGTTAGGCATCCTCAAAGGCTATGTGGGTCTCAGTGGTGCAATCATCACACAATTGTACTCTGCTATTTACTATGACGACACAAGGGCTTTGATTTTGCTCATAGGTTGGCTTCCAGCTGCTATTTCCTTTGCTTCCCTTCGAACCATTCGCTACATGAAGCCAGTTAGGCAGCCCAATGAGCTCAAGGTTTTCTACAACTTTCTGTATATCTCTCTTGGCCTTGCCGGGTTTCTTTTGGTCATGATTATTATACAGAAAAGGGTCAACTTTACTCAGAGTGAGTATGGTGTGAGCGCCGCTATTGTGATCTTCTTGCTCTTCCTCCCGCTTGCTGTTGTTTCCATCGAAGAATATAAGATCTGGCAGAGTAAAAGGCTTGCTTTGGTGGATCCTTCCCCGGTGAAAATAGTAACCGAGAGTGAAAGGATTAAACCGAATGAGGCTACTAACGGTAGCAATTCAGTGTCAGCAGTTTCCAACGACACCAAGTGGTGGGAAAATGTGTTTAGTCCACCACCAAGAGGTGAGGATTATACGATACTTCAAGCACTATTCAGCATCGACATGTTCCTCTTATTCATGTGTAGCATCTGTGGTATTGGGGGCACGTTGACTGCAATAGATAATCTGGGTCAGATAGGAAAATCGCTTCGATACCCCAAGAAAAGCATAAGCACTTTCGTGTCCCTGGTAAGCATTTGGAATTACCTAGGACGTGTTTTCTCTGGATTTGTTTCTGAACATTTTCTACACAAGTACAAATTCCCTCGTCCTCTCATGCTTACTTTAACTATGCTGCTGTCATGTGTTGGCCACCTTCTGATAGCATTTGATGTGCCAAATGGTCTTTATGCGGCTTCGGTAATCATAGGGTTTTGTTTTGGAGCTCAGTGGCCGTTACTTTTTGCCATTATATCAGAGCTTTTTGGACTAAAATATTATGCAACTTTGTACAATTTTGGAAGTGCAGCGAGTCCACTGGGCCTATACGTTCTTAATGTGGTGATGACTGGGCATTTGTACGACAAAGAAGCAAAGAAGCAACTGGCAGCGTTAGGGCTTGAAAGAAAGAAAGGGCAAGAATTGAATTGTATAGGGCTTCATTGCTTCGAGTTATCCTTCATCATTATCACAGCTGCAACTTTCTTTGGTGCCATTGTTTCACTGATTTTGGTGGCTAGGACAAGAAAGTTTTACAAAGGTGACATATACAAGAGATTCAGGGATGCAGCCACGGTCTCAGAAACTGAAATGGCAAGCGTCAAGAAGGCAAACGGTGCAGAGAAAAATGAGAAACATGTGGTGCCAACTCATCCTCTTCATCAGAACAGCGACTAG 1812 0.4542 MAIGAASMGVNGWGDMKSLTVQVITGRWFVVFASFLIMAAAGATYMFGLYSGDIKATLGYDQTTLNLLSFFKDMGTNVGVLSGLINELTPPWVVLAIGALLNFFGYFMIWLSVTQKIARPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYSAIYYDDTRALILLIGWLPAAISFASLRTIRYMKPVRQPNELKVFYNFLYISLGLAGFLLVMIIIQKRVNFTQSEYGVSAAIVIFLLFLPLAVVSIEEYKIWQSKRLALVDPSPVKIVTESERIKPNEATNGSNSVSAVSNDTKWWENVFSPPPRGEDYTILQALFSIDMFLLFMCSICGIGGTLTAIDNLGQIGKSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLHKYKFPRPLMLTLTMLLSCVGHLLIAFDVPNGLYAASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSAASPLGLYVLNVVMTGHLYDKEAKKQLAALGLERKKGQELNCIGLHCFELSFIIITAATFFGAIVSLILVARTRKFYKGDIYKRFRDAATVSETEMASVKKANGAEKNEKHVVPTHPLHQNSD* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2587 603 MobiDBLite consensus disorder prediction 580 603 - -
Vra8g2587 603 SUPERFAMILY MFS general substrate transporter 26 556 IPR036259 -
Vra8g2587 603 Pfam Nodulin-like 27 271 IPR010658 -
Vra8g2587 603 Gene3D MFS general substrate transporter like domains 341 558 IPR036259 -
Vra8g2587 603 PANTHER MFS TRANSPORTER 10 595 - -
Vra8g2587 603 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 595 - -
Vra8g2587 603 MobiDBLite consensus disorder prediction 580 596 - -
Vra8g2587 603 CDD MFS_Mch1p_like 26 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2587 Vra-Chr8 43798382 43800459 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2587 5 567 Nodulin-like Gene Family AT2G39210 71.605 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2587 - - pvu:PHAVU_007G024800g 1095.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2587 8 43798382 43800459 Vra8g2587 8 43798382 43800459 ECH