Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2586 ATGGCGACAGGTGCAGTTTCCATGGGTGTGAATGGATGGGGAGACATGAAGAGTCTCACTGTCCAGGTCATCACCGGTCGATGGTTCGTCGTCTTTGCCTCCTTTCTAATCATGGCTGCTGCCGGAGCCACCTACATGTTCGGTCTCTACTCCGGAGACATCAAAGCCACCCTTGGCTACGACCAAACCACTCTNAATCTCCTNAGTTTCTTCAAGGACNTNGGNANNAACGTNGGAGTCCTCTCTGGTCTTATCAACGAGCTCACTCCACCTTGGGTGGTNCTNGCCATNGGTGCNNTNCTAAACTTNTTNGGNTACTTCATGATNTGGCTNTCNGTCACNNAGANAATAGCCAGACCCCAAGTGTGGCAGATGTGTCTCTACATCTGCATAGGTGCTAACTCTCAGTCCTTCGCCAACACCGGTTCCCTAGTCACCTGTGTCAAGAACTTCCCTGAAAGTCGTGGTGCTGTGTTGGGCATTCTCAAAGGCTATGTGGGTCTCAGTGGTGCAATCATCACACAATTGTACTCTGCTATTTACTATGACGACACAAAGGCTTTGATTTTGCTCATAGGTTGGCTCCCAGCTGCTATTTCCTTTGCTTTCCTTCGAACCATTCGCTACATGAAGCCCGTTAGGCAGCCCAATGAGCTCAAGGTTTTCTACAACTTTCTGTATATTTCTCTTGGCCTTGCGGGGTTTCTTTTGGTCATGATTACTATACAGAAAAGGGCCGACTTTACTCAGAGTGAGTATGGTGTGAGCGCCGCTATTGTGATTTTCTTGCTCTTCCTCCCACTTCTTGTCGTTTCTATAGAAGAACATAAGATCTGGCACAGTAAAAGACTTGCTTTGGTTGACCCCTCGCCCGTGAAAATAGTGACTGAGGGTGAAAAAGTGAAACAGAATGAGACTACTAATGGGAACACTTCAGTTACAGCGATTTCCAACGACACCAAGTGGTGGGAAAATGTTTTTAGTCCTCCAGAAAGAGGTGAGGACTACACGATACTTCAAGCGCTATTCAGCGCCGACATGTTAATACTTTTCATAACTTGCATATGCGGTGTTGGTGGAACGCTCACTGCAATAGACAATTTGAATCAGATAGGATCCTCTCTTAGATACCCAAAGAAAAGTATAAGCACTTTCGTATCCCTAGTGAGCATTTGGAACTATATGGGAAGGGTTTTCTCTGGATTTGTTTCTGAACATTTTCTACACAAGTACAAGTTTCCCCGTCCTCTCATGCTTTCTTTAACTCTGCTCTTATCATGTGTTGGTCACCTTCTGATAGCATTTGATGTGCCAAATGGACTTTATGCTGCTTCGGTGATCATCGGGTTTTGTTTTGGCGCACAGTGGCCTTTACTTTTTGCCATTATATCAGAGCTTTTTGGACTAAAATATTATGCAACTTTGTACAATTTTGGAAGCGTAGCAAGTCCATTAGGGTTATACGTGCTTAATGTGAAAATGACTGGGTATTTGTATGACAAAGAAGCAAAGAAGCAACTGGCAGCGTTGGGGCTCGAGAGAAAGGAAGGCCAGCAATTGAACTGTATCGGGGTGGATTGCTTCAAGTTATCCTTCATTATTATCACAGCTGCAACTTTCTTTGGTGCCATTGTTTCACTGATTTTGGTGGCTAGGACGAGAAAGTTTTACAGTGGTGACATATACAAGAGATTCCAGGATGCAGCCACGGTGTCAGAAACTGAAATGGCAGGGTTAGAGAACACCAGCAAGCCAGAGAAAGATGCCAAAAATATGGTGCCAACTCAGAAGTAG 1794 0.4443 MATGAVSMGVNGWGDMKSLTVQVITGRWFVVFASFLIMAAAGATYMFGLYSGDIKATLGYDQTTLNLLSFFKDXGXNVGVLSGLINELTPPWVVLAXGAXLNXXGYFMXWLSVTXXIARPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGAVLGILKGYVGLSGAIITQLYSAIYYDDTKALILLIGWLPAAISFAFLRTIRYMKPVRQPNELKVFYNFLYISLGLAGFLLVMITIQKRADFTQSEYGVSAAIVIFLLFLPLLVVSIEEHKIWHSKRLALVDPSPVKIVTEGEKVKQNETTNGNTSVTAISNDTKWWENVFSPPERGEDYTILQALFSADMLILFITCICGVGGTLTAIDNLNQIGSSLRYPKKSISTFVSLVSIWNYMGRVFSGFVSEHFLHKYKFPRPLMLSLTLLLSCVGHLLIAFDVPNGLYAASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVKMTGYLYDKEAKKQLAALGLERKEGQQLNCIGVDCFKLSFIIITAATFFGAIVSLILVARTRKFYSGDIYKRFQDAATVSETEMAGLENTSKPEKDAKNMVPTQK* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2586 597 SUPERFAMILY MFS general substrate transporter 27 555 IPR036259 -
Vra8g2586 597 PANTHER MFS TRANSPORTER 10 597 - -
Vra8g2586 597 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 597 - -
Vra8g2586 597 MobiDBLite consensus disorder prediction 576 597 - -
Vra8g2586 597 CDD MFS_Mch1p_like 26 543 - -
Vra8g2586 597 Pfam Nodulin-like 27 271 IPR010658 -
Vra8g2586 597 Gene3D MFS general substrate transporter like domains 335 557 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2586 Vra-Chr8 43792322 43794391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2586 14 567 Nodulin-like Gene Family AT2G39210 72.222 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2586 - - pvu:PHAVU_007G024800g 1029.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2586 8 43792322 43794391 Vra8g2586 8 43792322 43794391 ECH