Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2531 ATGGCTATCGTAGATTTGTTCAACTTCCTCTTGTTTTATCACCTTGTACTCTTCCTCTGTGCTGGTTATGGATATGGGCACCAAGGTTGTCCACACTCCTTTATTTGTGGCAATCTTGGGTCTTTTCATTACCCTTTTACCAAGGCAGAACAACCAGACTGTGGCTTGATACCTATACATGGTTGTGATAATCCTCTATCTATCCAAAAACTGATTCAGCTGGAGAAAAATGGAAAACACTTTGTGCTTACAGGCAACATTCAGCAGGATGGGATTTCAATTTCGGATGAAGATTTGCACCAGCGTTTACAAAACAACATCTGTGATACTTCGAATAATAACTACAGTCTTCAATCTCATTCTCCTTTATACTCTTATTATATAAAATATAATGTGACACTGTTCCGATGCAAACATGACCTCAATATGAAACCCCCACCACATTATTTTACTCACTCCTGCACTGAGTATGGTTATGATATCTATTATGACAGCCTTTCCTTACCTAAGAATGATGAGGCTCGTGGAATTTTCTCATCCTGCTCAGTTCTTCACTTAGCAAAAAAGGACAAGGCCGATACCACAGACATTCTATCGTTTTTATCTGCTCAGATGGTTGTTCAAGTAGTATTATCTAAGGATTGTGATGAGTGCTATAATCTCAGACGAGGTCAATGTCATCTTGACGGCGATCGTCAGTTCTACTGTCACAAAGAGCCAAAGCATAGCAGTAAAACTTTGAGGCTGGTACTTGGACTTGTAACAGGTTTATGCGTGATATTATTAGCTATAGTGCTAACTGGATGCCTTATATTTAGACGAAAATGCACTCCTTCAGATCCTCAACACCAATCGAGAAACCCAGACACTGATTCAATTGGTCCCAGCTCAAATCCAGACCCCGAAAATTGCAGGTTCTACTACAGAGTCCCTCTCTTCTCTTACAAGGAGCTTAAAGAAGCTACATACAATTTCCACAACACCAGGCAACTTGGAAGTGGAGGCTTTGGAACCGTTTACTATGGAAAACTGCTAGATGGACGAGAAGTTGCTATCAAGCGTCTCTATGAGCATAACTATAGGCGAGTTGAACAGTTCATGAACGAAGTTCACATCCTCACTCGCTTGCGCCACACAAATCTGGTGTCCCTCTATGGCTGCACTTCACATCGCAGTCGTGAGCTACTGCTCGTGTATGAACACGTTCGAAATGGTACTGTTGCTTGCCATCTCCACGGTGATTTTGCAAGGCCACACACTCTTCCATGGCACATAAGAATGAAAATTGCGATAGAGACCGCAAGTGCATTGTGTTATCTCCATGCTTCTGACATCATCCACCGTGATGTCAAAACCAAAAACATTCTCCTTACTCAAAGTTTCAGTGTTAAGGTTGCTGACTTTGGTCTTTCAAGGCTGTTCCCGAATGATGTCACACATGTCTCCACTGCTCCGCTAGGGACCCCAGGTTACCTTGATCCGGAATATCACGAATGCTACCAGCTTACAAGCAAGAGTGATGTGTATAGTTTTGGCGTTGTGCTTATTGAACTGATATCTTCTAAGCCAGCCGTTGATATGAGCAGGCATAGGGATGAGATAAACTTGGCTAACTTGGCAATAAAGAAGATTCAGAAAAGTGCATTTAGTGAGCTGGTTGATCCTTCTCTTGGTTTTGATTGGGACAGTGAGGTAAAGAGGATGATGATTTCAGTGGCAGAATTGGCCTTTCAGTGTTTGCAACGAGACAAAGATTTGAGACCTTCAATGGACGAGGTTTTGAAGGTGCTTATGAGAATTGAAAATGACACGCCTGAGCATCTGGATGAAGAACATTTACGTCCACCCTCTCTACCTTCACCAGATTGGGATGAAAATGGATTATTGAAAAACATGACGGTACAACTTTCACCTAAAGCCGTCACTGATAGATGGCACAGTGAATCCACTGCCTCCAATGCCAGTGCTTAA 1971 0.4231 MAIVDLFNFLLFYHLVLFLCAGYGYGHQGCPHSFICGNLGSFHYPFTKAEQPDCGLIPIHGCDNPLSIQKLIQLEKNGKHFVLTGNIQQDGISISDEDLHQRLQNNICDTSNNNYSLQSHSPLYSYYIKYNVTLFRCKHDLNMKPPPHYFTHSCTEYGYDIYYDSLSLPKNDEARGIFSSCSVLHLAKKDKADTTDILSFLSAQMVVQVVLSKDCDECYNLRRGQCHLDGDRQFYCHKEPKHSSKTLRLVLGLVTGLCVILLAIVLTGCLIFRRKCTPSDPQHQSRNPDTDSIGPSSNPDPENCRFYYRVPLFSYKELKEATYNFHNTRQLGSGGFGTVYYGKLLDGREVAIKRLYEHNYRRVEQFMNEVHILTRLRHTNLVSLYGCTSHRSRELLLVYEHVRNGTVACHLHGDFARPHTLPWHIRMKIAIETASALCYLHASDIIHRDVKTKNILLTQSFSVKVADFGLSRLFPNDVTHVSTAPLGTPGYLDPEYHECYQLTSKSDVYSFGVVLIELISSKPAVDMSRHRDEINLANLAIKKIQKSAFSELVDPSLGFDWDSEVKRMMISVAELAFQCLQRDKDLRPSMDEVLKVLMRIENDTPEHLDEEHLRPPSLPSPDWDENGLLKNMTVQLSPKAVTDRWHSESTASNASA* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2531 656 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Vra8g2531 656 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 9 655 IPR044652 -
Vra8g2531 656 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 9 655 - -
Vra8g2531 656 MobiDBLite consensus disorder prediction 281 299 - -
Vra8g2531 656 MobiDBLite consensus disorder prediction 607 627 - -
Vra8g2531 656 Pfam Protein kinase domain 325 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g2531 656 Gene3D Transferase(Phosphotransferase) domain 1 402 610 - -
Vra8g2531 656 SMART serkin_6 325 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g2531 656 Gene3D Phosphorylase Kinase; domain 1 300 401 - -
Vra8g2531 656 ProSiteProfiles Protein kinase domain profile. 325 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g2531 656 MobiDBLite consensus disorder prediction 277 302 - -
Vra8g2531 656 SUPERFAMILY Protein kinase-like (PK-like) 308 620 IPR011009 -
Vra8g2531 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2531 Vra-Chr8 43247156 43250013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2531 29 656 Receptor kinase-like Gene Family AT1G25390 48.038 3.38e-174 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Vra8g2531 Pkinase 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2531 - - gmx:100791822 1011.13