Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2452 ATGGCGACGTTTTCAATTGGGACACACTTGTCCATGTTCCAGAATTTGCGCAACTCCAAACTTCCCCTACATGGTCTGTGCACTGTTGAACCTTCGCCCTTCTTTGGCTCTTCTTCTGGCAGAACCAGATTAACGGCTACAATTCCCACTTTGCTCCGTCACAATGTATTGGCACGTGCTGAAGATAAGGCCAGGGATCCTACATCTTCTTCGTTTCAGACTCAACAAAGTTCACCGCCACAGAACTTGACACCGGAATCTGGAAGTTGCGATCCCCTCTGTTCACTCGATGAAACAAGCTCGCAAGAGTTTGAAGAAAGCTACCAGCCTAAGACCGATTCTCTCAAAGCTGTAGCAATATTAGGAGCAGCTGCAACTGGGGCAGTGGCAATTAACCATTCTTGGGTGGCCACCAATCAGGATCTTGCTATGGCTTTGCTATTTGTACTAGGATATGCAGGGATCATTTTTGAAGAATCTCTAGCCTTCAATAAAAGTGGCGTGGGACTGGTGATGGCTGTAGGCTTATGGGTGATACGGAGTCTAGGGGCTCCTTCAACTGATATAGCTGTTTCAGAGCTTACACATGCATCTGCGGAAGTCAGTGAAATAGTATTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATTGTTGATTCTCATCAAGGATTTAAGCTGGTTACTGACAATATAACAACCCGAAATCCGCGCCTCCTCCTCTGGGTGATTGGATTTGTTACGTTTTTTCTCAGTTCAGTTCTAGACAACCTTACATCTACCATAGTTATGGTTTCCCTATTGCGGAAATTAGTACCTCCATCTGAATACCGAAAGATTCTTGGAGCTGTTGTTGTAATAGCAGCAAATGCTGGGGGTGCATGGACTCCTATCGGTGATGTTACAACTACTATGCTGTGGATACATGGCCAAATATCTACAGTTCAAACAATGAAGGGTTTATTTGTACCTTCAGCAGTTTCTCTGGCTGTTCCACTGGCTCTAATGTCTCTGACTAGCGAAGTTAACGGGAAGGGACAAAATTCTCCCAATGTCTTGGCATCTGAACAAATTGCTCCTCGAGGACAGCTTGTTTTCTCAGTTGGTTTAGGAGTTTTGATTTTTGTCCCAGTCTTCAAGGCACTAACAGGTTTGCCTCCTTACATGGGAATGCTGCTGGGACTCGGTGTGCTTTGGATCCTCACAGATGCAATCCATTACGGCGAATCTGAAAGGCAGAAGCTAAAAGTACCACAGGCTCTCTCAAGGATAGACACTCAAGGAATACTATTCTTCCTGGGAATTCTATTGTCCGTTAGCAGCTTGGAGGCAGCAGGGATTCTTCGAGAAATAGCAAATTACCTTGATGCACATGTTGCTAGCACTGAACTGATTGCAAGTAGTATTGGTCTTATATCTGCAGTAATAGACAATGTTCCATTGGTTGCTGCAACAATGGGAATGTATGATGTCGTCTCTTTCCCTCAAGATTCTGAGTTCTGGCAATTGATTGCATTTTGTGCCGGAACTGGAGGTTCCATGTTAATTATTGGCTCAGCTGCCGGAGTTGCGTTCATGGGGATGGAAAAGGTTGACTTCTTTTGGTACTTCCGAAAGATCAGTGGCTTTGCTTTTGCAGGTTATGCTGCTGGTATTGTTGCCTATCTAGCACTTTATAAACTCAACATCTCCCTACCAACTCTAGCAGAGGTTCCTTTCCTCTCTGGTTCATAA 1731 0.446 MATFSIGTHLSMFQNLRNSKLPLHGLCTVEPSPFFGSSSGRTRLTATIPTLLRHNVLARAEDKARDPTSSSFQTQQSSPPQNLTPESGSCDPLCSLDETSSQEFEESYQPKTDSLKAVAILGAAATGAVAINHSWVATNQDLAMALLFVLGYAGIIFEESLAFNKSGVGLVMAVGLWVIRSLGAPSTDIAVSELTHASAEVSEIVFFLLGAMTIVEIVDSHQGFKLVTDNITTRNPRLLLWVIGFVTFFLSSVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTVQTMKGLFVPSAVSLAVPLALMSLTSEVNGKGQNSPNVLASEQIAPRGQLVFSVGLGVLIFVPVFKALTGLPPYMGMLLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGILFFLGILLSVSSLEAAGILREIANYLDAHVASTELIASSIGLISAVIDNVPLVAATMGMYDVVSFPQDSEFWQLIAFCAGTGGSMLIIGSAAGVAFMGMEKVDFFWYFRKISGFAFAGYAAGIVAYLALYKLNISLPTLAEVPFLSGS* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2452 576 MobiDBLite consensus disorder prediction 63 95 - -
Vra8g2452 576 MobiDBLite consensus disorder prediction 67 95 - -
Vra8g2452 576 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 1 576 IPR045016 GO:0006814|GO:0015297
Vra8g2452 576 Pfam Citrate transporter 154 508 IPR004680 GO:0016021|GO:0055085
Vra8g2452 576 PANTHER BNAC03G40960D PROTEIN 1 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2452 Vra-Chr8 42551064 42557049 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2452 1 576 Antiporters AT3G19490 74.573 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2452 - - gmx:100779521 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2452 8 42551064 42557049 Vra8g2452 8 42551064 42557049 ECH