Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2436 ATGGATTTAGCCATGCATGATTTTGCAGAAATGACCAATTACATTAATTCAGTAACAAACTCAAAGCTATTTCTGCTCCAGCATTCACAGGGTAAAATGTCTTTTGCTGTTGCCTTCACTCAACTGGAGATTGCAGAAAACTTAGAAGCTGCAGCTCTTGCAGCATCCAAGGACGTTCAGAAACTCAACCACAGAAGAACCAAATTAAGAGGTGCCAGAGTTTCCACAGTTTCTTCGCTTCAGTCTCAACCAAGTTCATGGGAAGGGTTTCAGGATCTTGCAATGGCATTGGTATTTGTAATAGGCTATGTAGTCATCATATTTGAAGAATATTTATCCTTCAATAAAAGTGGAGTGGGACTGTTGATGGCCGTAAGCTTATGGGTGATACACATTATTGGGGCTCCATCAACTGATATAGAAGTTTCAGAGTTAACACATGCATCTGCACAAGTCAGTGAAATAGTATTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATAATTGACGCTCATCGAGGATTTAAGCTTGTTACGGACAATATAACAACCCAAAATCCACGCCTTCTCCTATGGGTGATTGGATTTGTTACGTTCTTTCTAAGTTCAGTTCTGGACAGCCTGGCATCTACCGTAGTTATGATTTCTCTATTGCGAAAATTGTTACGTCTATCAGAGTTACGGAAGATATTGGGAGCTGTTGTTGTAATAGCAGCAAATGCTGGTGGTGCATGGAGTCCTATTGGTGCTGTTACCACTACTATGCTGTGGATACACGGTCAAATATCTGTAGTACAAACAATGAAGGATTTGTTTATACCTTCAATCATTTCTCTAGCTGTTCCTCTAGTTCTGATGTCCCTGACTAGTATAGTTAATGATGGAAAAGGACAAAACTCTCTCGGTATCTTTGCCTCTGAGGAGAGTGCTCCACAAGGACTGCTTGTTTTCTTATTGAGTTTAGGAGCTTTGCTTTTTGTCCCAGTGTTCAGGGCCCTCACAGGTTTACCTCCCTACATGGGAATGCTTCTCGGACTTGGCATGCTTTGGATAGTCACCGATGTTATCCATTATGGTGATTCTGAGAGGAAAAAACTAAAAGTGCCACATGCTCTGTCAAGAATAGACACTCAGGGAGCACTGTTTTTCCTGGGAATTCTATTATCCGTTAGCAGCCTGGAGGCAGCAGGGATTCTGCAGGAAATAGCAAATTACTTTGATGCACATGTGCCGAGTAGTGAAGTGATTGCAAGTGCTATTGGACTCATATCTGCTGTAATAGACAATGTTCCATTGGTTGCTGCAACAATGGGAATGTATGACGTCTCTTCTTTCCCTCGAGATTCTGAATTCTGGCAATTGATTGCATTATGTGCTAGTACTGGTGGATCCATATTAGTTGCTGGTTCAGCTGCTGGAGTTGCGTTCATGGGCATGGAAAAGGTGAACTTCTGTTGGTACATGCGGAAGGTTAGTGGCTTTGCCTTAGCAGGTTATGCTGCTGGTATTGCTGCCTATTTAGTGCTTCATAAATCAAGAATTTGA 1545 0.4181 MDLAMHDFAEMTNYINSVTNSKLFLLQHSQGKMSFAVAFTQLEIAENLEAAALAASKDVQKLNHRRTKLRGARVSTVSSLQSQPSSWEGFQDLAMALVFVIGYVVIIFEEYLSFNKSGVGLLMAVSLWVIHIIGAPSTDIEVSELTHASAQVSEIVFFLLGAMTIVEIIDAHRGFKLVTDNITTQNPRLLLWVIGFVTFFLSSVLDSLASTVVMISLLRKLLRLSELRKILGAVVVIAANAGGAWSPIGAVTTTMLWIHGQISVVQTMKDLFIPSIISLAVPLVLMSLTSIVNDGKGQNSLGIFASEESAPQGLLVFLLSLGALLFVPVFRALTGLPPYMGMLLGLGMLWIVTDVIHYGDSERKKLKVPHALSRIDTQGALFFLGILLSVSSLEAAGILQEIANYFDAHVPSSEVIASAIGLISAVIDNVPLVAATMGMYDVSSFPRDSEFWQLIALCASTGGSILVAGSAAGVAFMGMEKVNFCWYMRKVSGFALAGYAAGIAAYLVLHKSRI* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2436 514 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 74 512 IPR045016 GO:0006814|GO:0015297
Vra8g2436 514 Pfam Citrate transporter 103 459 IPR004680 GO:0016021|GO:0055085
Vra8g2436 514 Coils Coil 45 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2436 Vra-Chr8 42422806 42429605 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2436 91 511 Antiporters AT3G19490 77.435 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2436 - - vra:106771718 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2436 8 42422806 42429605 Vra8g2436 8 42422806 42429605 ECH