Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2427 ATGGTGATCAAAGTAGATGAAACAATCGTATCAACAGCCAAAGAACAACCAGTTGAAGTGATGAACGGAGAAAAGAACAACTATGGAAGTGAGGATGACAACCCCAAAGAGTGGTTGAACCTGAACATAGGAGGCACTTCACTCTCAACTGTTGCAGACCCTGATGTACAATCAAGACCAACCACTGCAAAAGTTTTTTCATGCAACTTCTGCATGAGGAAGTTCTTCAGTTCACAGGCATTAGGAGGTCATCAAAACGCCCACAAAAGGGAAAGGGGAGCTGCCAGAAGGTACCAATCTCAGAGGTCGATGACAGTAATGGGCTTCTCCATGAACACACCAATTATGCTTCGATCACTCGGTGTCCAGCCCCATTCACTCGTGCACAAGCCATGCAGAGGTGGTACTGTGGTGACACCAAGCTTCCATGATGCACATGCAAGGCTTGCGATGGCTTGGACGCCTTTCTCGTCAGAGGATCAAACAGATCTGGTGTGGCCAGGTAGCTTTCGCTTGGTTCCACAACAGCCCCAGCCACCACAGGAGCCACTTAAGCTTGATTTAGACCTCAGACTCTGA 579 0.4819 MVIKVDETIVSTAKEQPVEVMNGEKNNYGSEDDNPKEWLNLNIGGTSLSTVADPDVQSRPTTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQRSMTVMGFSMNTPIMLRSLGVQPHSLVHKPCRGGTVVTPSFHDAHARLAMAWTPFSSEDQTDLVWPGSFRLVPQQPQPPQEPLKLDLDLRL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2427 192 MobiDBLite consensus disorder prediction 173 192 - -
Vra8g2427 192 PANTHER ZINC FINGER PROTEIN 4-LIKE 9 192 - -
Vra8g2427 192 SUPERFAMILY beta-beta-alpha zinc fingers 62 92 IPR036236 -
Vra8g2427 192 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Vra8g2427 192 PANTHER ZINC FINGER PROTEIN 4-LIKE 9 192 - -
Vra8g2427 192 Gene3D Classic Zinc Finger 49 112 - -
Vra8g2427 192 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2427 Vra-Chr8 42356323 42357299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2427 48 180 C2H2 Transcription Factor Family AT1G24625 40.426 9.80e-20 81.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2427 8 42356323 42357299 Vra8g2427 8 42356323 42357299 ECH