Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2384 ATGTCTCACTCGCCGGACTCTCCCTCCGCCGCCGCTAACTTCCTCTGCCACCAACGCGCCAGCGACTTTGCCTCCGACCACCATCCCCCTCCCACCCCTCCCTCTCCGGATTCCGATGACTCGCCCATCGCCGGCCTCCTCGATGCCGAGGTCCACCACATGCCGGAGAAGGACTACCTCCGCCGCTGCCGCGACCGCTCCATCGACGTCACCGCGCGCCTTGACGCCGTCAACTGGATCTTAAAGGTTCAAGCATTCTACAAGTTTTCTCCGGTAACGGCGTTTCTCTCCGTCAACTATTTGGACCGTTTCCTCTCTCTATGTTCTCTTCCCCAATCGAGTGGGTGGCCGTTTCAGCTGCTATCAGTGGCATGCCTGTCTCTGGCAGCAAAAATGGAAGAGTCTCATGTCCCGTTCTTACTGGACCTCCAACTGTTCGAACCCAAATTCGTCTTTGCTCCCAAAACGATTCAAAGAATGGAGCTTTGGGTCATGTCCAATCTCAAATGGAGACTTCGCTCCGTCACGCCCTACGATTATCTTAACCATTTCATCACCAAGCTCCCTTCCTCCTCTTCTTCTGAATCCACAACTCACTATTTCTCCGCCGCCTCCAATCTCATCCTCAGCACCACCCGTGTGATTAACTTCTTGGGATTCGCGCCCTCCACAGTGGCAGCCGCCGCGGTGCTCTGTTCGGCTGGCCGTGACATTGTTTCTGCCAATGGCCAATTGTGGCTGCGTTTTCATGATAGAGTAAACGAGGAAATGGTGAGATGCTGTCACCAACTAATGGAGGAGTACGTGGTGGACACGTGTTACGCATCCAGCTCTACCATGAAAGAGAGAGTAGCCGAGCCGCCTCCGTCCAGTCCCGTCGGCGTGCTGGACGCTGCCAACTGTACCAGCTGCGACACACCTTCTGAGAGGATTTTCTTAGGCTCAACAGAGGAACAACGGCCAGAAGCCGAGCCACCAAATAAACGGCTTCGATCCTCTGCTCCGAATGCACCACAGCAGTAG 1023 0.5543 MSHSPDSPSAAANFLCHQRASDFASDHHPPPTPPSPDSDDSPIAGLLDAEVHHMPEKDYLRRCRDRSIDVTARLDAVNWILKVQAFYKFSPVTAFLSVNYLDRFLSLCSLPQSSGWPFQLLSVACLSLAAKMEESHVPFLLDLQLFEPKFVFAPKTIQRMELWVMSNLKWRLRSVTPYDYLNHFITKLPSSSSSESTTHYFSAASNLILSTTRVINFLGFAPSTVAAAAVLCSAGRDIVSANGQLWLRFHDRVNEEMVRCCHQLMEEYVVDTCYASSSTMKERVAEPPPSSPVGVLDAANCTSCDTPSERIFLGSTEEQRPEAEPPNKRLRSSAPNAPQQ* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2384 340 Pfam Cyclin, N-terminal domain 47 172 IPR006671 -
Vra8g2384 340 MobiDBLite consensus disorder prediction 22 44 - -
Vra8g2384 340 SUPERFAMILY Cyclin-like 177 273 IPR036915 -
Vra8g2384 340 ProSitePatterns Cyclins signature. 73 104 IPR006671 -
Vra8g2384 340 PANTHER CYCLIN-D2-1-LIKE 25 322 - -
Vra8g2384 340 PANTHER CYCLINS 25 322 IPR039361 -
Vra8g2384 340 CDD CYCLIN 73 162 IPR013763 -
Vra8g2384 340 SMART cyclin_7 78 166 IPR013763 -
Vra8g2384 340 MobiDBLite consensus disorder prediction 307 340 - -
Vra8g2384 340 SMART Cyclin_C_2 175 304 IPR004367 -
Vra8g2384 340 Gene3D - 56 173 - -
Vra8g2384 340 Pfam Cyclin, C-terminal domain 175 277 IPR004367 -
Vra8g2384 340 SUPERFAMILY Cyclin-like 40 172 IPR036915 -
Vra8g2384 340 Gene3D - 46 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2384 Vra-Chr8 42019787 42021746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2384 3 271 Core Cell Cycle Gene Families AT1G70210 42.446 3.14e-64 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2384 K18810 - gmx:100776178 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2384 8 42019787 42021746 Vra8g2384 8 42019787 42021746 ECH