Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2362 ATGGGTAGCTGTTCTTTCTTGACATGGTTTCTTTGTTTTCTGGTTTTCATGGCTACAATCACATCTCAAGCCAAAGCAGATGTAACTTCACAAGACTTCCACTACTTCTGCGACTCCAACAATGACAGGGGAAACTACACAACCAACGGCATCTACAGCCAAAACCTCAACAGCGCTCTCGTCATCGTCGCTCTCCATGCCTCCAGAAACGGTTTCTTCAACGTCTCAATCGGCAAGGGCACAAACAGAGCCAACGCCATTGCCCAGTGCAGAGGTGACGTCACGCCAACAGAGTGCACCAAGTGCCTCGCCCAAACCAGAGCCAACCTCACCCGCGTTTGCAGCAACCGGAAGGAGGCCATCGGCTGGTACGAGAACGAAAAGTGCATGCTTCGCTACTCCGACCGCACTATAACGGGCCTCGACGAAATTGGGCCTGCTTACTTCGTGTGGAACCTCAACGACGCACCCAACGCCGACCAGTTCAATCGAGTGGTGAAGAAGCTTCTGAACGGCCTCAGAGACACCGCGGCGTCGGCTACCAAGGGTCGGAAATACGCGGTGTCGACTGCGACGGGCCCAGATGAGCAAGTCATATATGGGCTTGCGCAGTGCACCCCTGATTTGATTGGGCCTCAGTGCCTTGACTGCTTGGTCCAGTCCATCGCTGAACTTCCACGGTGCTGTAATAACAGGATAGGTGCCAGAATTATTAGACCTAGCTGTTACGTAAGGTACGAAACTGATTTCCTTTTCTTTGGGCCTCCGGCACCCGCCGCTTAACCCAACAGCTATTTCGTTTATGCGCCTCCATCATCGTCCACCGACAACACTTCTTCTTCACGCGGAAAGAGCAACACAGCAGGGACTATCATCGCCATAGTAGTGCCAGTTGCTTGTGTTGTTTTGCTGCTCGCTCTTCTCTGCATCTATTTAAGCCTAAGGAAGCAAAGAAAAAAAATTGAATTTGAAAGAGAAGAAGAAAGTGATGAAGATGAAGTCGCATTTACTGAGTCATTGCAATACAACTTCAACACCATACGTGTTGCTACAAATGAATTCGCCGATTCTAATAAACTTGGACAGGGCGGGTTTGGAGCTGTTTACAAAGGTCAGCTTTCCAATGGGCAAGAGATTGCTGTCAAAAGATTGTCAAGAGATTCTGGGCAAGGGGATTTGGAATTTAAGAATGAAGTGCAATTAGTGGCCAAGCTTCAGCATCGAAATTTAGTTAGGCTACTTGGCTTCGGCCTGGAAGGAAGAGAAAGGCTACTTGTCTATGAATTTGTTCCTAATAAAAGTCTTGATTACTTCATATTTGATCCAACCATGAAACCTCAATTGGACTGGCAAATGCGCTACAAAATCATTAAAGGTATTGCTCGAGGGATTCTCTACCTTCACGAAGATTCTAGACTACGGAATATACATCGTGATCTTAAAGCAAGTAATATTCTCTTGGACAGAGAGATGAATCCAAAGATAGCAGATTTTGGTATGGCAAGACTAGTTTTAATGGATCAAACTCAAATAAATACGAGTAGAATTGTTGGAACTTATGGATATATGGCACCAGAGTATGCAATGCATGGACAGTTTTCAGCGAAATCAGACATCTTCAGTTTTGGTGTACTGATTCTTGAGATTGTAAGCGGCCAGAAAAACAGTGGAATCAATAATGGAGAGAGCATGGAGGATTTGCTAAGCTTCGCTTGGAGAAGTTGGAAGGAGGGGAAGGCTATAAATATTGTAGATCCATCACTCAAGAGCAATTCACGGAATGAAATGCTGAGATGCATCCATATTGGTTTACTTTGTGTTCAACAAAATTTAGTTGACAGACCAACCATGGCTACCATTGTACTGATGCTTAATAGCCATTCTTTGAGTCTCTCTATTCCTGCAGAACCTGCATTTTTATATAACAGTAGAACTAGAAGCTTTCCAGGGATGCAGTCATGGGAGTATAATTTAAGGGAAAGAGGATCAAGTGAACCGATACTTAAATCAGCTCAAGAATCAGAAAATGAACTTTCAATTACTGAGCTACTCTCGCTAGATGTTGTTCATCAGAGTGGATCTTTCATCATTCATGTTTCTTCTCTTAAACCAAAGTACAATGTATTGGAAAGTCGAGTAAAATGTGGGTGCAGTATCTTGTTTAAATATGTAACCACACGTACTTTCTCTAAACCGAGACTCAAACCTGTGAGACTCAAAACCTGTTGA 2229 0.4437 MGSCSFLTWFLCFLVFMATITSQAKADVTSQDFHYFCDSNNDRGNYTTNGIYSQNLNSALVIVALHASRNGFFNVSIGKGTNRANAIAQCRGDVTPTECTKCLAQTRANLTRVCSNRKEAIGWYENEKCMLRYSDRTITGLDEIGPAYFVWNLNDAPNADQFNRVVKKLLNGLRDTAASATKGRKYAVSTATGPDEQVIYGLAQCTPDLIGPQCLDCLVQSIAELPRCCNNRIGARIIRPSCYVRYETDFLFFGPPAPAA*PNSYFVYAPPSSSTDNTSSSRGKSNTAGTIIAIVVPVACVVLLLALLCIYLSLRKQRKKIEFEREEESDEDEVAFTESLQYNFNTIRVATNEFADSNKLGQGGFGAVYKGQLSNGQEIAVKRLSRDSGQGDLEFKNEVQLVAKLQHRNLVRLLGFGLEGRERLLVYEFVPNKSLDYFIFDPTMKPQLDWQMRYKIIKGIARGILYLHEDSRLRNIHRDLKASNILLDREMNPKIADFGMARLVLMDQTQINTSRIVGTYGYMAPEYAMHGQFSAKSDIFSFGVLILEIVSGQKNSGINNGESMEDLLSFAWRSWKEGKAINIVDPSLKSNSRNEMLRCIHIGLLCVQQNLVDRPTMATIVLMLNSHSLSLSIPAEPAFLYNSRTRSFPGMQSWEYNLRERGSSEPILKSAQESENELSITELLSLDVVHQSGSFIIHVSSLKPKYNVLESRVKCGCSILFKYVTTRTFSKPRLKPVRLKTC* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2362 741 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Vra8g2362 741 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 9 665 - -
Vra8g2362 741 Pfam Salt stress response/antifungal 158 248 IPR002902 -
Vra8g2362 741 Pfam Salt stress response/antifungal 37 135 IPR002902 -
Vra8g2362 741 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 665 - -
Vra8g2362 741 ProSiteProfiles Gnk2-homologous domain profile. 144 251 IPR002902 -
Vra8g2362 741 ProSiteProfiles Protein kinase domain profile. 353 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g2362 741 Pfam Protein tyrosine and serine/threonine kinase 357 621 IPR001245 GO:0004672|GO:0006468
Vra8g2362 741 Gene3D Transferase(Phosphotransferase) domain 1 429 631 - -
Vra8g2362 741 Gene3D - 147 250 IPR038408 -
Vra8g2362 741 Gene3D - 33 137 IPR038408 -
Vra8g2362 741 ProSiteProfiles Gnk2-homologous domain profile. 34 138 IPR002902 -
Vra8g2362 741 CDD STKc_IRAK 359 624 - -
Vra8g2362 741 Gene3D Phosphorylase Kinase; domain 1 314 428 - -
Vra8g2362 741 SUPERFAMILY Protein kinase-like (PK-like) 339 651 IPR011009 -
Vra8g2362 741 SMART serkin_6 353 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2362 Vra-Chr8 41825846 41832954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2362 9 642 Receptor kinase-like Gene Family AT4G21410 49.153 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vra8g2362 PK_Tyr_Ser-Thr 6.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2362 - - vra:106770676 1394.41