Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2330 ATGGCTGGTAGGTTGCCTGGTGTTGGGTTGCTTGCAAGAAAGAGAGCAGAGAGCAACCACAGACATGAAAACCGACACAACTATTACCTAAAGGAATCACTCTACCCACCTTCCATTCCTCTCACTGTCTTAGATGAAACTGCTCTCAAGGCCAGACAGAGGCTTCACCACAAGCTTGGACACTTCTTTTCCTCCTACAGATCAGGTGAGAATCCGAGAAAAAAAGGGGGAAAAGTGAGAGAAAACAGTAACCAGAAGAAGGACGGAGGATTAGGTCGGAAGTTATTGGAGAGTTCGTGGTTATTGCGTGGCAACAGGGTTAAGGAAGAGAGAAAAGTGTGTGCTGTTTGCCTTGAGGAGTTGGGGGAAGAGCAACATGTTATGAACCTTTCATGCTCCCACAAGTATCATTCTGCATGTCTTCTTCCATGGCTTGCAGCTCATCCCCACTGTCCTTATTGTCGAACTCCAGTACAACTCTGA 483 0.4679 MAGRLPGVGLLARKRAESNHRHENRHNYYLKESLYPPSIPLTVLDETALKARQRLHHKLGHFFSSYRSGENPRKKGGKVRENSNQKKDGGLGRKLLESSWLLRGNRVKEERKVCAVCLEELGEEQHVMNLSCSHKYHSACLLPWLAAHPHCPYCRTPVQL* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2330 160 MobiDBLite consensus disorder prediction 71 91 - -
Vra8g2330 160 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 38 157 - -
Vra8g2330 160 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 38 157 - -
Vra8g2330 160 ProSiteProfiles Zinc finger RING-type profile. 114 155 IPR001841 -
Vra8g2330 160 SUPERFAMILY RING/U-box 113 158 - -
Vra8g2330 160 MobiDBLite consensus disorder prediction 65 91 - -
Vra8g2330 160 SMART ring_2 114 154 IPR001841 -
Vra8g2330 160 Pfam Ring finger domain 113 155 IPR001841 -
Vra8g2330 160 CDD RING-H2_PA-TM-RING 113 155 - -
Vra8g2330 160 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 159 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2330 107 158 C3H Transcription Factor Family AT1G49850 42.308 8.80e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2330 - - gmx:100527548 270.396