Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2327 ATGAACGTCGGCGGAACCGCCACCTTCCGATCCATCCTCGACAAGCCCCTCAACCAGCTCACGGAGGATGACATTTCTCAGCTCACTCGCGAAGACTGTCGCAGATTCCTCAAAGAAAAAGGGATGCGCAGGCCTTCATGGAACAAATCGCAGGCGATCCAACAGGTCATTTCCCTCAAAGCGCTTCTCGAACCTTCCGACGATGATTCCCCTCCTCCTCCTCCCCCCATGCACCACCAGCCTCATTCTCCTCAACCTCAAGCCAATTTGACTCAACCTCAGCCCGAGGCCCCTCCTCCTGAGGAACCCGCCTTTCTCGCGGCCGACGACATTCAGAAATCTGCCTCTTCTGGGGAAAAACCTACGGAGACTAATAACACCAACACCAACGCTAACGTTGCTAGCCCCAGAGGGTGTGCAACTAGTGGATCAATTGGCCAAATGACAATTTTCTATTGTGGGAAGGTGAACGTCTATGATGGAGTCTCACCTGATAAGGCACGGGCAATCATGCAGCTTGCTGCAAGTCCTGTCCAGTTTACTCAGGATGATCCTTTACATGGAAATACATCAGCTTGGTCTTCTCCTTGCCACTTACCGATGGATAAGGATGTCCGCATCCCTGTTGATACAGCTATCCTTCAGGTTGCTCAAGCAGATAAGATGGTGGAATATCCTCTGCAATACAGAGAGAAAGGGAGCATAACTCTTGATGCTGATGGTCAAGCAAGCAGAAAAGTGTCATTGCAGCGATATCGTGAAAAGCGTAAGGACAGGGGAAGATTTAAAGGCAAGAAATTGACTGGAATAACTTCATCTAACTTCGAGATGTATTTGAACCTTCCAGTGAAGGTCCATGCCTCAAATGGGAATTCAAGCCGTAGTAGCACTAGCTCTCCACCACAGCCTAGGCTGCCTCTAGCTTCTAGTGGTTCAGCTGACAACCAGCTCAAAGTTGCCCTTCCCATTGATCTCAATGACAAAGATGTTCAAGAATGCTAA 1002 0.494 MNVGGTATFRSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLEPSDDDSPPPPPPMHHQPHSPQPQANLTQPQPEAPPPEEPAFLAADDIQKSASSGEKPTETNNTNTNANVASPRGCATSGSIGQMTIFYCGKVNVYDGVSPDKARAIMQLAASPVQFTQDDPLHGNTSAWSSPCHLPMDKDVRIPVDTAILQVAQADKMVEYPLQYREKGSITLDADGQASRKVSLQRYREKRKDRGRFKGKKLTGITSSNFEMYLNLPVKVHASNGNSSRSSTSSPPQPRLPLASSGSADNQLKVALPIDLNDKDVQEC* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2327 333 Pfam Jas motif 242 259 IPR018467 -
Vra8g2327 333 ProSiteProfiles Tify domain profile. 141 176 IPR010399 -
Vra8g2327 333 MobiDBLite consensus disorder prediction 287 313 - -
Vra8g2327 333 MobiDBLite consensus disorder prediction 115 139 - -
Vra8g2327 333 MobiDBLite consensus disorder prediction 59 139 - -
Vra8g2327 333 Pfam tify domain 147 175 IPR010399 -
Vra8g2327 333 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 6 318 IPR040390 -
Vra8g2327 333 MobiDBLite consensus disorder prediction 67 82 - -
Vra8g2327 333 SMART tify_2 141 176 IPR010399 -
Vra8g2327 333 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 6 318 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2327 1 288 Tify Gene Family AT4G14720 47.267 2.24e-66 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vra8g2327 tify 3.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2327 - - gmx:100813937 477.633