Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2295 ATGACACTGCAAACAGTGGTTACTGCGGTCTCAGTGTATCTGATTCTGATCCATGCATCAATGGTTGCTAACTCAGCCATGGATCCCTACAAAGCCCTCAACATCATCCTCAACCCAAACGGCACCCTCACACGCTTAAGCATTTCGCCGCAAAGCCCTCCCTCGCCAGATCCCTCGCTCCCCACACCCGTTCTCTCCAAAGACCTCCCCATCAACAAATTCAACCACACCTGGGCGCGGATCTACCTACCCCACAAAGCACTCCATCATTCCCCCAACCCCAATCTACCCCTCATCGTCTTCTACCATGGCGGAGGCTTCATCTTCGAAAGTGCAGCCTCCACTTACTTCCACGACTTCTGCGTCAGAATGGCCGACACCACGCAATCCGTCGTGGTTTCCGTCGACTACCGCCTCGCCCCGGAGCACCGCCTCCCCGCCGCCTACGAAGACTCCGTGGAGGCGCTGCACTGGATCAAAGCCTCCAACGACGACTGGTTGCACCACGCCGATTACTCCCGCTGCTATCTGATGGGGGAGAGTGCCGGGGGAAACATTGCCTACACGGCGGGTCTACGTGCGGCGGCGGAGGTTGGGAAGTTGAAACCGCTGAAGATTTCAGGGTTGATATTGATTCAACCATTTTTTGGTGGGAAGAAGAGGAGTCCATCAGAGATAAGGCTTGCCGAGGACAACACTATACCTTTGGCTATCACGGATTTGATGTGGAATCTGTCACTGCCCGTTGGCGTTGATCGTGATTACCCGTATTCAAATCCAACTATCAACGGTGGGGATAAGATTTTGGATGAGATTAAGGTTCTTGGATGGAGGGTTGCGGTGTTTGGATGTGAAGGGGACCCACTGGTGGCCCGCGAGAGAGAGCTGGTGAAATTGCTTGAGCATAAGGGTGTGCACGTGGTTGGAAAGTTTTATGAAGGGGGTCGACATGGCATCTTTGTCGGTGACCCTTCCATGTCCCTCCAAGTCTTTCGTTTACTTAAAACTCTTCATTAG 1017 0.5339 MTLQTVVTAVSVYLILIHASMVANSAMDPYKALNIILNPNGTLTRLSISPQSPPSPDPSLPTPVLSKDLPINKFNHTWARIYLPHKALHHSPNPNLPLIVFYHGGGFIFESAASTYFHDFCVRMADTTQSVVVSVDYRLAPEHRLPAAYEDSVEALHWIKASNDDWLHHADYSRCYLMGESAGGNIAYTAGLRAAAEVGKLKPLKISGLILIQPFFGGKKRSPSEIRLAEDNTIPLAITDLMWNLSLPVGVDRDYPYSNPTINGGDKILDEIKVLGWRVAVFGCEGDPLVARERELVKLLEHKGVHVVGKFYEGGRHGIFVGDPSMSLQVFRLLKTLH* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2295 338 Gene3D alpha/beta hydrolase 30 336 IPR029058 -
Vra8g2295 338 SUPERFAMILY alpha/beta-Hydrolases 40 324 IPR029058 -
Vra8g2295 338 PANTHER ARYLACETAMIDE DEACETYLASE 25 332 - -
Vra8g2295 338 PANTHER CARBOXYLESTERASE 120-RELATED 25 332 - -
Vra8g2295 338 Pfam alpha/beta hydrolase fold 99 320 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2295 Vra-Chr8 41217076 41218269 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2295 51 310 Carbohydrate Esterase AT1G68620 41.155 2.98e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2295 - - var:108324928 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g0930 1 10850556 10851810 Vra8g2295 8 41217076 41218269 PCT