Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2294 ATGTTTGTGTCTGGGCAAGTGGATCCCTTCCACCATCTGAAAATCCTCCCAAACTCAGACGGCACCATCACTCGCCTCCGTGCAGACCCACTCACCCATCCAACTTTCGATGCCACCCTCCCCATCCCCGTTCTCACCCAAGACACAACCATCAACCAATCAAACAAAACCTTCGCCCGCATATTCCTCCCACGTCCATCACTCCATAATTCCTCCACCAACCTCCCTCTCATCGTTTACTTCCACGGCGGCGGCTTCATCCTCTTCAGCGCCGCCACACACTTCTTCCACGACGCCTGCGTAAACCTCGCAAAAGACACCAATTCCATCGTCGTTTCCGTCGACTACCGTCTCGCCCCCGAACACCGACTCCCCGCTGCCTACGACGACGCCGTCGAAGCGCTCCACTGGCTCAAATCCAAGCCACACCATTGGTTGAGAAACCACGCCGATTATTCCAACTGTTACCTCATGGGAAGTAGCGCCGGAGCGAACATCGCATACCACGCGGCTCTACGTGTGGCGGCGGAAACTAACTCTGATGGGATTAATTACCTGGAGCCACTTAAGATCCGAGGGCTGATATTAAGTCAACCGTTTTTCGGGGCCACAGTGAGGGTTCCTTCTGAGGTGAGTCTTGCGGAGGATCCGGTTTTGGCGCCGCACGTGTGTGACGTGCTGTGGGAGCTGTCGTTGCCCGTTGGGGTTGACCGCGAGCACGAGTATTGCAATCCTCGTGGTGGCGATGGCGGCGTGAGTTTGGAGAGGGTGAGGGAGCTGGGGTGGCGCGTGTTGGTGAGTGGGTGCCACGAGGACCCTCTGGTCGACCATCAGATTGGTCTGGCCACACTGGTGGCGGAGAAGGGCGTTCCCGTTCTGACTAGCTTTAACCCAACGGGATCTCATGGGGCTGAAGTTCGTGATCCTCTCCACCAAAACCGGCTCCATCACCTCGTTAAACATTTCATTGCTCCTCCTCTTCCTCCTCCTCCCTCCATCCACAATTTATCACCTCAAAACTCTGCTTAA 1029 0.5607 MFVSGQVDPFHHLKILPNSDGTITRLRADPLTHPTFDATLPIPVLTQDTTINQSNKTFARIFLPRPSLHNSSTNLPLIVYFHGGGFILFSAATHFFHDACVNLAKDTNSIVVSVDYRLAPEHRLPAAYDDAVEALHWLKSKPHHWLRNHADYSNCYLMGSSAGANIAYHAALRVAAETNSDGINYLEPLKIRGLILSQPFFGATVRVPSEVSLAEDPVLAPHVCDVLWELSLPVGVDREHEYCNPRGGDGGVSLERVRELGWRVLVSGCHEDPLVDHQIGLATLVAEKGVPVLTSFNPTGSHGAEVRDPLHQNRLHHLVKHFIAPPLPPPPSIHNLSPQNSA* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2294 342 PANTHER CARBOXYLESTERASE 120-RELATED 7 325 - -
Vra8g2294 342 Pfam alpha/beta hydrolase fold 78 303 IPR013094 GO:0016787
Vra8g2294 342 Gene3D alpha/beta hydrolase 10 325 IPR029058 -
Vra8g2294 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 78 94 IPR002168 GO:0016787
Vra8g2294 342 PANTHER ARYLACETAMIDE DEACETYLASE 7 325 - -
Vra8g2294 342 SUPERFAMILY alpha/beta-Hydrolases 35 309 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2294 Vra-Chr8 41214686 41216102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2294 19 254 Carbohydrate Esterase AT5G16080 38.776 5.67e-48 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2294 - - gmx:100777786 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2294 8 41214686 41216102 Vra8g2294 8 41214686 41216102 ECH
Vra8g2294 8 41214686 41216102 Vra1g0930 1 10850556 10851810 PCT