Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2287 ATGGGCAAGGAGTGGCATTGGGGTGGAAGGTCCTCCAAGAGGGGTGGAGAAGCTCAAACAGAAATCCCTTCTGGTTGCATGTGTGCAGTCTTTCAGGCTTTCGATTTTCATCCATTTCACTTTTCCATTAACCACCAGCCATCCTCTTTCAAGTCTCGGACCCGAGAACACCACACTGTCTCTAAAGGAGCTGAAGGACCAAGGCATAGCTTGGAGTCAGAAGATGGTACTACAGTGTCATCAATCTCAAAAGAAGCAAATTTTAAAATACCAAAGAACATTCAGATCAGAACAAGAGGGAGCACAAGATCAAAAACAGAAATTAGTGATCTTTCGTCAGAAATCAGTGTCTCTCCAGGTACCAAGACACCGACTTTGGTTGCAAGGTTAATGGGTCTGGATCTTCTTCCTGATGCACATTCCCCTTCTTCCCCATGCCTTTCCACTCCAAACCTTTATAGACCACGACGACATATCAAAATAATCAAACATAGAAACAGCACGGGAAGTGACTTCTTGCCTGAGATTCCTAAAATGTCCTCAGCAAGAAAATCGGATGTTGAGCATAGACTCTCTCTCCAGATCAACAAGGAGAACACAGTTTCGTATGAGGATTTTGACGTTCCTCTGTTTTCTTTTACAAAGAGAAAATATGATGAGAACAATAGCAGGAGTCCAAGTCACTATGCCAAACAAATTGTCAAACAGGTTAGAGAAAGTGTGAGCAGAAAGGTTGGACGCGACATCACCAACACTATCAAAAACAGAGACCATGAAGAAGAGGAATGTGTAAGCAAAATCAAATTCAAGAAAACTTCAAAAACTTCAGTGAACGAATCCTGCCCTGGAAAACTTTCAAACTCATCTTATTCCCCTAGGCTCAGCAGATTTATTGAATCCAAACAAAAATCAAGCACAACACCATCGCCTCCACATGCGACCAACATTGAAACTGAGCTTCCAGAAGTTTCTACAAAGCCAAAGCCTCAAGCATTGGCCAAGAAAGAGTTGCAGAATCAAAAAGCAGTCACAAAATACAAGAAAACAACCTTTGGAAAGACGAGTAGGAGAGTTAATAAGCCTCCGCAAACATCAATTAGAAATCAGCAAGAAGAGCCATTTATTATTCGTTACCCATTAGTCTCTAAAGTCAATGACATCAAAACCAAAAAGAAGAGAACTCTTCCACTTTCAACCGATCTTTTTAATAGTCACAACACGGTTCCAAATCTTCTCCCTGTCAAGATAGGTCTTTCTCCTCAAAAACAGACACGGGTGATTGATGACGATGAATGTCGAGATGCAAAACGCAACACACGGTTATTTAGTTGTTCGCGCCAGACGTACAGAGAAGAAGCGCCACGACCACCCGCACCCCGAGGACCAACAACCTGCGATGACGACAAATCTCACGGCGCCTTCACCACCATCTCCTCCGCCGCACTCCACGAAGGGCCAGAGTTTCACTACGTCACGATCATCTTGTCCCGTACCACTGGGTCCCACAGCAACGCCACCACGCATATACCCCACCTCCATTTTCAGTGGTTCTCTCCCACCCACCCCTTGGACCCTTCACTCTTTCACAGTCTGGAGCGCTACCCAACATCCCATTCCTTTGTCTCTTTTCCAGAAGACAACAAAGATTGCGTATTTGAGCGGAAACACGGGCTGGGTCCGCGCTGCAACCGTAGATTGCTGTTCGATTTGGTGGACGAGTTGCTGTCGGAGATTCTAGTTAAGCCGAAGCGTTTCAGAGGGAGGCTGTTGGAGACGGTGTGGGAGAGGGTTCGGAGTTTACCACGTGCGAAGTGCGAGGTTTTGGAGGACGTTGATGGGTTGGTAGAGATTGTGGAGATGAGGGAAGAAGAGGAAGAAGAAGGGTTGGTGAAGGAGATAGAAGGGAACATAGTGGAGTGGTTGGTGCATGAAACGTTAACCGTTATGGTTGGTGGCGCAGATACGTAA 1968 0.4558 MGKEWHWGGRSSKRGGEAQTEIPSGCMCAVFQAFDFHPFHFSINHQPSSFKSRTREHHTVSKGAEGPRHSLESEDGTTVSSISKEANFKIPKNIQIRTRGSTRSKTEISDLSSEISVSPGTKTPTLVARLMGLDLLPDAHSPSSPCLSTPNLYRPRRHIKIIKHRNSTGSDFLPEIPKMSSARKSDVEHRLSLQINKENTVSYEDFDVPLFSFTKRKYDENNSRSPSHYAKQIVKQVRESVSRKVGRDITNTIKNRDHEEEECVSKIKFKKTSKTSVNESCPGKLSNSSYSPRLSRFIESKQKSSTTPSPPHATNIETELPEVSTKPKPQALAKKELQNQKAVTKYKKTTFGKTSRRVNKPPQTSIRNQQEEPFIIRYPLVSKVNDIKTKKKRTLPLSTDLFNSHNTVPNLLPVKIGLSPQKQTRVIDDDECRDAKRNTRLFSCSRQTYREEAPRPPAPRGPTTCDDDKSHGAFTTISSAALHEGPEFHYVTIILSRTTGSHSNATTHIPHLHFQWFSPTHPLDPSLFHSLERYPTSHSFVSFPEDNKDCVFERKHGLGPRCNRRLLFDLVDELLSEILVKPKRFRGRLLETVWERVRSLPRAKCEVLEDVDGLVEIVEMREEEEEEGLVKEIEGNIVEWLVHETLTVMVGGADT* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2287 655 MobiDBLite consensus disorder prediction 299 321 - -
Vra8g2287 655 MobiDBLite consensus disorder prediction 448 469 - -
Vra8g2287 655 Pfam DUF761-associated sequence motif 112 141 IPR032795 -
Vra8g2287 655 MobiDBLite consensus disorder prediction 299 325 - -
Vra8g2287 655 MobiDBLite consensus disorder prediction 1 20 - -
Vra8g2287 655 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 308 - -
Vra8g2287 655 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 308 655 - -
Vra8g2287 655 MobiDBLite consensus disorder prediction 50 72 - -
Vra8g2287 655 MobiDBLite consensus disorder prediction 47 84 - -
Vra8g2287 655 PANTHER DUF4378 DOMAIN PROTEIN 308 655 - -
Vra8g2287 655 PANTHER DUF4378 DOMAIN PROTEIN 1 308 - -
Vra8g2287 655 Pfam Domain of unknown function (DUF4378) 487 644 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2287 Vra-Chr8 41139938 41143358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2287 94 647 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 31.672 1.86e-43 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2287 - - vun:114190841 1171.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2287 8 41139938 41143358 Vra8g2287 8 41139938 41143358 ECH
Vra1g0935 1 10944796 10948411 Vra8g2287 8 41139938 41143358 PCT