Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2284 ATGGCCCTTCTGTCAACAGAAAACATTTTTCCAATCATTTTCCTCCTTTTGACAACATTTTCAATATCCAAAGCTGAACTTCATGTTCATTACTACGATCAAACCTGCCCACAATTGGAAAAAATAATTTCAGAGACTGTTCTCAAAGCTTCCAAGCATGATCCAAAAGTTCCAGCTCGTATCTTGAGGATGTTCTTCCATGATTGTTTAGGAGGCCCCTATTGGAATGTACTAAAAGGAAGGAAAGATGGAAGAGTATCAAAGGCATCTGATACTATCATCTTACCTGCTCCAAACTTCAATGCGAGCCAACTAATTCTGAGTTTTGCCAAGAGAGGTTTGACAGTTAAAGACTTGGCAACTTTATCGAGAGGTCACACTTTAGGCTTTTCACATTGTTCTTCCTTTGAGGCATCTCTTCTAAATTTTAGTTCACTACACGACACAGATCCAAGTATGAACGCTGAGTTTGCCTTAGACCTAAGAAAGAAGTGTCTAAAACCAAACCACAACCACAATGCAGGACAGTTCCTGGACTCAACAGCAGTATTTGACAATGACTATTACAAACAACTGTTGACTGTAAAAGGTTATGCCAAGAAAACCTTTAAGCATGTCATGAAGTATATTTGA 633 0.3855 MALLSTENIFPIIFLLLTTFSISKAELHVHYYDQTCPQLEKIISETVLKASKHDPKVPARILRMFFHDCLGGPYWNVLKGRKDGRVSKASDTIILPAPNFNASQLILSFAKRGLTVKDLATLSRGHTLGFSHCSSFEASLLNFSSLHDTDPSMNAEFALDLRKKCLKPNHNHNAGQFLDSTAVFDNDYYKQLLTVKGYAKKTFKHVMKYI* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2284 210 ProSiteProfiles Plant heme peroxidase family profile. 24 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2284 210 Gene3D - 71 95 - -
Vra8g2284 210 Gene3D Peroxidase, domain 2 96 198 - -
Vra8g2284 210 PRINTS Haem peroxidase superfamily signature 71 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2284 210 PRINTS Haem peroxidase superfamily signature 118 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2284 210 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2284 210 PANTHER PEROXIDASE 66 71 198 - -
Vra8g2284 210 PANTHER PEROXIDASE 66 7 70 - -
Vra8g2284 210 Pfam Peroxidase 71 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2284 210 Gene3D - 27 70 - -
Vra8g2284 210 SUPERFAMILY Heme-dependent peroxidases 27 197 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra8g2284 210 PANTHER PEROXIDASE 25-RELATED 71 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2284 210 PANTHER PEROXIDASE 25-RELATED 7 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2284 Vra-Chr8 41108530 41110444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2284 9 70 Peroxidase AT5G51890 61.290 1.61e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2284 K00430 - gmx:100799516 227.639