Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2246 ATGGGGTTAGGTATACCTGCTTTTCCCTTGACGATCGTGACTCACGTTCTGGGCGTTGTTGCCACCGTTCTCGTATTGGTTTGGCTCGTCAGTTTCAGGGGAGGCTTGGCTTGGGAAGATGAAAACAAGCAACTCATCTTCAATATTCATCCATTTCTTATTGTTTTTGGCCTCATAGTTCATGGAGGTGAAGCTATTATAAGTTACAAAGCTCTTCCCCTGAAGAAGGAAGTGAAGAAAGTGGTACACCTTGGTCTTCATGGAGCCGCTTTATCACTTGGAATAATTGGAATTTATACTGCCTTCAAGTTTCACAATGAAAGTGGGATTGCCAACCTATACAGTTTGCATTCGTGGCTTGGAATTGGGGTTATTGTCCTCTATGGCATTCAGTGGATATATGGGTTTGTGATCTTTTTCTACCCTGGTGGGACTCCAGATATTAGACGTTTCTCTCTTCCTTGGCATGCACTGTTTGGGCTCTTTGTGTTTGTCTTGGCTGTGGGAACAGCTACTCTTGGATTTCTGGAGAAGCTCACTTTCTTGGAGAACACAGGATTGGATAAGTATGGTTCTGAGGCTTTGCTTGTGAACTTCACTGCTATCATCACAATCTTATTTGGTGTCTTCGTTGTGCTATCTGCTTTAGCTGATACTCCCGCAGCAGCAGATGACTATGAAGCAATATAA 690 0.4348 MGLGIPAFPLTIVTHVLGVVATVLVLVWLVSFRGGLAWEDENKQLIFNIHPFLIVFGLIVHGGEAIISYKALPLKKEVKKVVHLGLHGAALSLGIIGIYTAFKFHNESGIANLYSLHSWLGIGVIVLYGIQWIYGFVIFFYPGGTPDIRRFSLPWHALFGLFVFVLAVGTATLGFLEKLTFLENTGLDKYGSEALLVNFTAIITILFGVFVVLSALADTPAAADDYEAI* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2246 229 Gene3D - 4 224 - -
Vra8g2246 229 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
Vra8g2246 229 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 1 1 225 - -
Vra8g2246 229 CDD Cyt_b561_ACYB-1_like 42 183 - -
Vra8g2246 229 PANTHER CYTOCHROME B561-RELATED 1 225 IPR043205 GO:0016491
Vra8g2246 229 ProSiteProfiles Cytochrome b561 domain profile. 13 216 IPR006593 -
Vra8g2246 229 SMART 561_7 49 175 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2246 Vra-Chr8 40738615 40741865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2246 1 218 Chloroplast and Mitochondria Gene Families AT4G25570 66.514 2.21e-103 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2246 K08360 - gmx:100527259 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2246 8 40738615 40741865 Vra8g2246 8 40738615 40741865 ECH