Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2226 ATGAATATCCTCGTGGCGCTCGCATTCTTGTGCCTGGCAACGTTGGCGCCATGGCGCGTTCGCTCGCAACAACAGAGGCTTCTCGTGAACATGACGCTCGTTTCCAAGGCCAAAGCTAGCGGCGCTCTGTGTTTGGACGGAAGTTTACCGGCGTATCACTTGCACAGAGGATTCGGTGCTGGTGAAAACAACTGGCTTCTTCAATTTGAGGGAGGTGGATGGTGCAATGACTTGAAATCATGCTTCGAGAGAGCCAAAACTCGGAGGGGTTCATCAAGTTATATGGTCAAATTGGAAGTGTTTTCTGGTATTTTAAGCAACAATGCCACCCTTAATCCTGATTTTTACAACTGGAACCGTGTAAAGCTGAGATACTGTGATGGAGCCTCGTTTACGGGAGACGCTGTGTTCTCTAACAAGACAACAACTCTTCATTTCAAAGGGCAAAAGATTTGGGAAGCCATTATTGACGACCTTCTACCACAAGGTTTGGGAAAGGCACGGAAGGCTTTGCTTTCAGGTTGCTCAGCAGGAGGTTTAGCAACCTTTCACCATTGTGACGACTTCGCCAAGCGTTTGCCAACGGATGCTAGTGTTAAATGCTTGAGTGATGCCGGTTTTTTTCTTGACGAAAGAGACATCAATTTGAACCACACCATGAGGTTTTTCGTTAAAAGTCTAGTTCGGTTACAGGGGATAGAGCAGAACCTGAATAGAAATTGCACCAGAGAACAGTACTTTCCAGCCTTGTGCTTCTTTCCACAATATGCGTTGAAATACATATCAACACCATATTTTATTTTGAACTCTGCCTATGATGTATACCAATTCCATCATATATTGGCGCCACCCTCTGCGGATTTGCACGGACACTGGAACAAGTGCAGGCTGAACCCGGCTGCATGTACAGCAGACCAAATTGCTATATTGCAAGGTTTTAGGCTCGACATGCTTGGAGCTTTGAAACCATTCTATATGAATTCAAGAAGAGGGGGGGTGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAACCACAGGATACATGGTTTAGAGATGATTCTCCAAGAATAAACAACAAGAGTATTGCAGAAGCGGTTGGTGATTGGTATTTTAGTAGGAACATAAGCAAGGAAATAGACTGTCCATATCCATGCGATGGAACTTGTCATAATATTATACCCGAACCTAAGCTCAGGTAA 1203 0.4447 MNILVALAFLCLATLAPWRVRSQQQRLLVNMTLVSKAKASGALCLDGSLPAYHLHRGFGAGENNWLLQFEGGGWCNDLKSCFERAKTRRGSSSYMVKLEVFSGILSNNATLNPDFYNWNRVKLRYCDGASFTGDAVFSNKTTTLHFKGQKIWEAIIDDLLPQGLGKARKALLSGCSAGGLATFHHCDDFAKRLPTDASVKCLSDAGFFLDERDINLNHTMRFFVKSLVRLQGIEQNLNRNCTREQYFPALCFFPQYALKYISTPYFILNSAYDVYQFHHILAPPSADLHGHWNKCRLNPAACTADQIAILQGFRLDMLGALKPFYMNSRRGGVFINSCFAHCQSEPQDTWFRDDSPRINNKSIAEAVGDWYFSRNISKEIDCPYPCDGTCHNIIPEPKLR* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2226 400 Pfam Pectinacetylesterase 22 375 IPR004963 GO:0016787
Vra8g2226 400 PANTHER NOTUM-RELATED 22 395 IPR004963 GO:0016787
Vra8g2226 400 PANTHER PECTIN ACETYLESTERASE 9 22 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2226 Vra-Chr8 40541938 40552400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2226 1 395 Carbohydrate Esterase AT5G23870 64.232 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2226 K19882 - gmx:100794453 709.138