Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2202 ATGGCGGCAGGACTCTCCACCGCCGCGACCTTAAAGCCCTACAATCTGCTCCAACCTCCAATTTCTCTCCCTAAACCAAACCAATCACTTTTCTTCCACCCCTTAAAATCTTTCCATCGAAGCACAATCCTTCGGCTAAGACCCCCCCGAAGAACGAGTGGCTTCTCCGTTTATGTCCTCACGGAGGATCCCAAACGGAACCTCCAGATCAAAACCAACGAAAAAGAAGAACAAGAAGTGAATTCTGGATCTGTGTCTGCAGGAGTGGAAGAGAAATTGGCCAGAAAGAGGTCCCAGAGGTTCACTTACCTCGTGGCTGCTGTTATGTCCAGCTTTGGCATCACCTCCATGGCAGTCTTCGCCGTTTATTATAGATTCTCCTGGCAAATGGAGGGTGGAGATTTTCCTTGGTCTGAAATGTTAGGTACATTTTCCCTCTCCGTTGGAGCTGTCGTGGCGATGGAATTTTGGGCAAGATGGGCTCATAGAGCACTTTGGCATGCTTCCTTGTGGCACATGCATGAGTCGCACCATCGACCAAGAGAGGGACCATTCGAGCTTAACGATGTTTTTGCAATTGTTAACGCTGTTCCTGCGATCGCTCTTCTCTCATACGGTTTTTTCCACAAGGGTCTGGTCCCTGGCCTCTGCTTCGGTGCAGGCCTTGGAATCACGGTGTTCGGGATGGCCTACATGTTTGTCCACGATGGACTCGTTCATAAGAGATTCCCAGTGGGCCCCATTGCCAACGTGCCCTACTTCAGAAGAGTTGCTGCTGCTCACCAACTCCACCATACAGACAAATTCAACGGTGTGCCATATGGGCTGTTTTTGGGACCAAGGGAACTTGAAGAAGTGGGAGGGGTTGAAGAGCTAGAGAAAGAGATAAGTAGGAGAATAAGGTCGGGTTCATGA 915 0.4984 MAAGLSTAATLKPYNLLQPPISLPKPNQSLFFHPLKSFHRSTILRLRPPRRTSGFSVYVLTEDPKRNLQIKTNEKEEQEVNSGSVSAGVEEKLARKRSQRFTYLVAAVMSSFGITSMAVFAVYYRFSWQMEGGDFPWSEMLGTFSLSVGAVVAMEFWARWAHRALWHASLWHMHESHHRPREGPFELNDVFAIVNAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHTDKFNGVPYGLFLGPRELEEVGGVEELEKEISRRIRSGS* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2202 304 Pfam Fatty acid hydroxylase 150 277 IPR006694 GO:0005506|GO:0008610|GO:0016491
Vra8g2202 304 PANTHER BETA-CAROTENE HYDROXYLASE 2 301 - -
Vra8g2202 304 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 2 301 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2202 Vra-Chr8 40359754 40361998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2202 1 220 Chloroplast and Mitochondria Gene Families AT4G25700 58.723 1.07e-86 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2202 K15746 - gmx:547758 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2202 8 40359754 40361998 Vra8g2202 8 40359754 40361998 ECH