Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2160 ATGGCATCTGATCACTCATCCCTTAACCAGACAAAATGCGTACTTGCAAACAATGACCTTGAGCAACAAGAAAGTATGGAGGTTGAAAGGAAGGACTTTGATTACTCAAAGCGATCTCAGTGGCTGCGTGCTGCTGTCCTAGGAGCCAATGACGGGTTGGTCTCAACAGCATCTCTAATGATGGGTGTGGGAGCAGTGAAGCAAGACATAAAAGTTATGATCCTAACAGGGTTTGCAGGGCTAGTGGCTGGTGCATGCAGCATGGCCATAGGGGAGTTTGTGTCTGTGTACTCGCAGTTGGACATAGAAGTTGCTCAGATGAAAAGGGAGAATGGCAGAGACAGAAATGAAGAGGAAGATGAGAAGGAGAAAGAGAGTTTACCAAACCCTATACATGCAGCAGCAGCCTCAGCTTTAGCATTTTCTGTTGGTGCAATTGTTCCTCTTCTTGCAGCCTCTTTCATAAGGGAATATAAGGTCAGGATTGGTGTGGTTTTGGGAGCAGTCAGCTTTGCTCTTGTGCTCTTTGGTTGGCTTGGTGCAGTGTTGGGTAAGGCTCCAACATTGAGGTCTTGTGTCAGAGTCTTGGTTGGGGGTTGGCTAGCCATGGCCATAACTTTTGGACTAACCAAGTTGATTGGCTCAAGTGGTCTTTAG 657 0.4688 MASDHSSLNQTKCVLANNDLEQQESMEVERKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKVMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKRENGRDRNEEEDEKEKESLPNPIHAAAASALAFSVGAIVPLLAASFIREYKVRIGVVLGAVSFALVLFGWLGAVLGKAPTLRSCVRVLVGGWLAMAITFGLTKLIGSSGL* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2160 218 Pfam VIT family 119 210 IPR008217 GO:0005384|GO:0030026
Vra8g2160 218 Pfam VIT family 42 125 IPR008217 GO:0005384|GO:0030026
Vra8g2160 218 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 8 215 - -
Vra8g2160 218 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 8 215 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2160 Vra-Chr8 39894075 39895165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2160 17 218 Nodulin-like Gene Family AT3G43660 72.772 8.75e-105 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2160 K22736 - gmx:100814343 353.214