Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2142 ATGCACTTCCCCATTCTCTTTCTCCTTCTCCTACCTTCCCTCTTCAAGCTTTCACATTCAGCCACAATTCTCGTAGACGGATCTTCAGAGTGGAAGAACCCCACAGTTTCCATCGGTGATTCCATCATTTTCAAGCACAAACAACATTTCAACCTCTACATTTTCAAGAACGAGAAAGCCTACAATCTCTGCAATATCACCCAAGCCACTCTTCTCACCAACCCCTACACGTGGCATCCATCACGACCCGGTTTCTTCTATTTTACCTTCCACAATGGGTCACTCAAGGCATGCAAAGATTCTGAAAAGCTAGCCATACAAGTTGCTTCTTCAGCAATGGTTCCAGAACCTTCTCCAGTGGCAACACCAGCTCCTTCTTCTGGTGGAGAGGTACCATCTTCCCCTTCATTTCCGTGGCCTTTTCGTCCACACCAAGCTGCTTCTTCACCTGGTCCAGCACCACAAGCACAAGCAGGTTCACCGGTGACAGTTCCGTTAGTGCCAGATAAAGGTGGCATGCCCTTCATTAACAGCAATCCTGCGGTTCCTCTGCCTACCGGTGAAGTTGATTCTGCCACCATACGCCCCATACCCACCTCTGGCCATCAAGGACAGGTGATGATTGGGTCATTTGGAGTTGGCATTGCAATGCACATCTTGGTTTTACTGCTGCTGTGA 678 0.4867 MHFPILFLLLLPSLFKLSHSATILVDGSSEWKNPTVSIGDSIIFKHKQHFNLYIFKNEKAYNLCNITQATLLTNPYTWHPSRPGFFYFTFHNGSLKACKDSEKLAIQVASSAMVPEPSPVATPAPSSGGEVPSSPSFPWPFRPHQAASSPGPAPQAQAGSPVTVPLVPDKGGMPFINSNPAVPLPTGEVDSATIRPIPTSGHQGQVMIGSFGVGIAMHILVLLLL* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2142 225 MobiDBLite consensus disorder prediction 115 164 - -
Vra8g2142 225 PANTHER OS04G0422700 PROTEIN 2 224 - -
Vra8g2142 225 SUPERFAMILY Cupredoxins 20 108 IPR008972 -
Vra8g2142 225 Gene3D - 19 111 IPR008972 -
Vra8g2142 225 PANTHER OS04G0422700 PROTEIN 2 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2142 Vra-Chr8 39710783 39713310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2142 2 128 Phytocyanin Superfamily AT2G25060 29.221 1.28e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2142 - - gmx:100800621 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra1g1520 1 24614410 24617209 Vra8g2142 8 39710783 39713310 PCT