Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2127 ATGGCAGTGGAAGAAGAGCTAACAAAAACGAAGGCCTTCATACGCCATGCTATTACTGGTCGTTGGTTCATGATCTTTGCCTCATGTCTCATCATGGCAGTTTCAGGGGCAACATACATGTTTGGTTTGTACTCCAACGAGGTAAAAACCTCGTTGGGGTATGACCAATCCACGCTCAACTTGATAAGCTTCTTCAAGGACCTTGGTGCCAACCTTGGAATTTTCTCTGGGTTGATCAATGAGGTAAGTCCCCCTTGGGTTATACTAGCCATGGGAGCCACAATGAACTTTGTGGGCTACTTCATGATATGGCTATCTGTCACTTCACGCATTGCCAAACCCCAACTGTGGCAAATGTGTCTCTACTTTTACATTGGTGCTAATTCTCAGTCCTTCGCTAACACTGGTGCTTTGGTGAACTGTGTCCAAAGCTTCCCAAGAAGCCGTGGAAGTGTAATTGGTCTTCTGAAGGGTTATGTGGGTCTAAGTGGAGCTATTTTCACTCAGCTATACCATGCCTTATATGGTGACAACTCCAAAACTCTTATATTCCTCATTGGCTGGCTTCCTGCTGCTGTTTCCTTCATTTTCCTTCCAACAGTTAGGGTCTTGAGTATCACCCCACAACCCAGAGATATCAAGGTTTTTTACCAACTTCTTTATATTTCACTTGGGGTTGCAGGGTTTCTCATGGTGTTGATAATTATACAAAACAGGTTGAGTTTCACAAGGGTGGAGTACATAGTGGATGGCATGGTGCTTCTTTTCTTGCTTCTTCTCCCACTTGGTATTGTGTTCAAAGAAGAGTTCAGACTTTGGAAGAACCAGAGCCAGAACCAGAACCAGAACCAGAACCAAACCGTCCCCGATCATGCAGATGCTGTTACTGCTTCTGCCTCAGTTATTGAATTGCCACAGCCAGAAGAAGCACATGCCGCTGCCTCTTCTCATCTGGAAGGAAAAACCAGCTCATGTTTAAAGAACGTTTTCAAACCTCCAAAAAGGGGTGAGGACTACACCATCTTCCAAGCTATTTTCAGCATTGACATGTTGATTCTGTTCATTGCATCAGTGTTTGGTGTGGGAGGAACATTGACGGCTCTTGACAATCTGGGACAGATTGGAAACTCATTGGGATACCCGAAAAAGAGCCTCACAACTTTTGTGTCTCTTGTGAGTATATGGAATTATCTAGGAAGAGCATCTTCTGGGTTTGCCTCAGAATATTTGTTAGCCAAATACAAATTCCCTCGTCCCTTGCTCCTCACTCTAGTCATGCTTCTCTCCTGTGTTGGCCATATTCTAATCGCTTTTGGTATCCCAAACTCACTTTATTTCTCTTCAGTGATTATTGGGTTTTGCTTTGGGGCCATATGGCCCTTAATGTTTGCCATCATATCTGAAATATTCGGCCTCAAATACTACTCAACTTTATACAATTTAGGTGCTGTGGCAAGCCCTGTTGGATCTTACATTCTGAATGTGAAAGTCACTGGTTTTTTGTATGATAAAGAGGCTTTGAAGCAGTTGAAGATGAAGGGACTCACAAGGCAAAAGGGAAAGGACTTAACTTGCTTGGGAGTGCAATGCTACAAGATGCCTTTCATCATAATCACTGCTTCAACCTTGGTTGGATGCTTTGTTTCCTTCATTCTAGTCTTAAGGACCAGAAAATTTTACAAAGGGGACATTTATCAAAAGTTCAGAGTTGAACCAGACACACCACAGAATCTTCCAACTTTTGCCACCACCACAAACTTCTCTCAAGAACCAGATAAAATCAACACCAAATAA 1794 0.4298 MAVEEELTKTKAFIRHAITGRWFMIFASCLIMAVSGATYMFGLYSNEVKTSLGYDQSTLNLISFFKDLGANLGIFSGLINEVSPPWVILAMGATMNFVGYFMIWLSVTSRIAKPQLWQMCLYFYIGANSQSFANTGALVNCVQSFPRSRGSVIGLLKGYVGLSGAIFTQLYHALYGDNSKTLIFLIGWLPAAVSFIFLPTVRVLSITPQPRDIKVFYQLLYISLGVAGFLMVLIIIQNRLSFTRVEYIVDGMVLLFLLLLPLGIVFKEEFRLWKNQSQNQNQNQNQTVPDHADAVTASASVIELPQPEEAHAAASSHLEGKTSSCLKNVFKPPKRGEDYTIFQAIFSIDMLILFIASVFGVGGTLTALDNLGQIGNSLGYPKKSLTTFVSLVSIWNYLGRASSGFASEYLLAKYKFPRPLLLTLVMLLSCVGHILIAFGIPNSLYFSSVIIGFCFGAIWPLMFAIISEIFGLKYYSTLYNLGAVASPVGSYILNVKVTGFLYDKEALKQLKMKGLTRQKGKDLTCLGVQCYKMPFIIITASTLVGCFVSFILVLRTRKFYKGDIYQKFRVEPDTPQNLPTFATTTNFSQEPDKINTK* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2127 597 Pfam Nodulin-like 21 265 IPR010658 -
Vra8g2127 597 Gene3D MFS general substrate transporter like domains 346 560 IPR036259 -
Vra8g2127 597 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 578 - -
Vra8g2127 597 PANTHER MFS TRANSPORTER 7 578 - -
Vra8g2127 597 CDD MFS_Mch1p_like 20 546 - -
Vra8g2127 597 SUPERFAMILY MFS general substrate transporter 21 561 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2127 Vra-Chr8 39266279 39268962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2127 11 569 Nodulin-like Gene Family AT2G39210 61.607 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2127 - - gmx:100814000 986.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2127 8 39266279 39268962 Vra8g2127 8 39266279 39268962 ECH
Vra3g0445 3 5157558 5159996 Vra8g2127 8 39266279 39268962 PCT