Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2111 ATGATGGCTACCAACACTTCCTTCTGCATTTTGTTAGTGCTTTCTTCCTTACTTTTTGCTTCCTCTCAAGCACTTGAAAGGCCTCCAATTGTGAATGGATTATCATGGAACTACTATTTCAAGAACTGTCCAAGGCTTGAGAGGATAGTCAGAAGCCATCTCCAGAACCTCTTCAAACAAGACAATGGTCAAGCACCTGCCTTACTCAGGATCTTCTTCCATGACTGCTTTGTTCAGGGTTGTGATGGGTCGATATTGTTGGATGGAAGTCCTAATGAAAAGGATCAACCGGCAAACATAGGAATAAGGCCAGAGGCGTTGCAGACTATTGAAGACCTTCGATCTCTTGTTCACAACCAGTGTGGAAGAGTTGTCTCTTGCGCTGACCTCGTTGTTCTAGCAGCACGTGAAGCTGTTTCTCTCTCTGGAGGTCCAAAATTTGCAGTGCCATTGGGAAGAAAGGACGGTCTAACCTTCAGCATAAACGGCACAAGAAACCTTCCACCGCCGTCGTCCAGAACCGGCAAACTCCTCGAAACGTTCGCCGCCAGAAATTTCAGCGCAACCGACGTGGTGGCGCTCTCCGGCGCGCACACATTCGGGCGGGCCCACTGCTCCACATTCTTCAGCCGAATCAACCAGACGGATACACCAATCGACCCGTCGTTGGCGAAGAACCTGAGCAACACGTGTCCTAGTGCGCAGTCTCCGAACACGGCGGTGCTGGACGTGCGAACCCCTAACGTGTTCGACAACAAATACTACGTGAACCTGGCGAACAGGCAGGGCCTGTTCACCTCGGACCAGGACCTGTTTAGCGACTCGAGGACAAAAGGGATTGTGAACTCCTTTGCTTCCAATGAGAAAGTGTTCTTCGATAGTTTTGCCGATGCGGTGGTGAAGTTGAGCCAGTTGGATGTGTTGACGGGGAAACAAGGACAGGTTCGCGCCAAATGCTCCGTGGCCAACACGAGGAAGGAGGGTTTGGTGGTGACCTCTGTGGTGGAAGAAGCTGTGGATTTACGCGGTCACATGTCATATTAA 1044 0.5067 MMATNTSFCILLVLSSLLFASSQALERPPIVNGLSWNYYFKNCPRLERIVRSHLQNLFKQDNGQAPALLRIFFHDCFVQGCDGSILLDGSPNEKDQPANIGIRPEALQTIEDLRSLVHNQCGRVVSCADLVVLAAREAVSLSGGPKFAVPLGRKDGLTFSINGTRNLPPPSSRTGKLLETFAARNFSATDVVALSGAHTFGRAHCSTFFSRINQTDTPIDPSLAKNLSNTCPSAQSPNTAVLDVRTPNVFDNKYYVNLANRQGLFTSDQDLFSDSRTKGIVNSFASNEKVFFDSFADAVVKLSQLDVLTGKQGQVRAKCSVANTRKEGLVVTSVVEEAVDLRGHMSY* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2111 347 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Vra8g2111 347 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Vra8g2111 347 PANTHER PEROXIDASE 25-RELATED 24 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2111 347 Gene3D Peroxidase, domain 2 169 303 - -
Vra8g2111 347 CDD secretory_peroxidase 33 321 IPR033905 GO:0004601|GO:0042744
Vra8g2111 347 SUPERFAMILY Heme-dependent peroxidases 29 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra8g2111 347 Pfam Peroxidase 50 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2111 347 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2111 347 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2111 347 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2111 347 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2111 347 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2111 347 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2111 347 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2111 347 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2111 347 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2111 347 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2111 347 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2111 347 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2111 347 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2111 347 ProSiteProfiles Plant heme peroxidase family profile. 33 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2111 347 PANTHER PEROXIDASE 24 327 - -
Vra8g2111 347 Gene3D - 37 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2111 Vra-Chr8 38913924 38915857 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2111 7 341 Peroxidase AT1G71695 50.720 1.33e-121 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2111 K00430 - gmx:100804126 534.643