Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2110 ATGGCTTCTATTTCTTCTAATAACAATGCTATTTTCAGCTTTCTTCTCCTCTCTATCATTCTTTCTGTTTCAGTTATTCAAGTGTGTCAGGCACAACCCAGGCCTCCTACTGTCAGAGGTCTATCATATACCTTCTATTCCAAAACTTGCCCTACGCTTAAATCCATAGTTAGAACCGAGCTCAAAAAGGTCTTCAAGAACGACATTGCTCAAGCTGCTGGCTTGCTTCGCATTCACTTCCATGACTGCTTTGTTCAGGGATGTGATGGGTCAGTTTTATTGGATGGATCTGCAAGTGGGCCGAGTGAGAAAGATGCACCACCAAACTTGACTTTGAGAGCTGAATCTTTTAGGATCATCGAAAGGATTCGTGGTCTGTTAGAGAAGAGCTGTGGAAGAGTCGTCTCATGTTCAGACATCACTGCCCTCGCTGCACGTGATGCTGTTTTCCTTTCAGGGGGACCAGACTATGAGATACCCTTGGGAAGGAGAGATGGGTTAACCTTTGCCTCTAGGCAGGTGACATTGGACAACCTTCCACCACCATCAAGCAACACCACCACCATCCTAAACTCCCTCGCCACCAAAAACCTCGACCCCACCGATGTGGTATCCCTCTCTGGTGGTCACACCATAGGCATAAGCCATTGCAGCTCTTTCAGCAACAGACTCTACCCTACACAGGACCCTGTTATGGACAAAACCTTTGGCAAAAACCTCAGACTCACTTGCCCCACCAACACCACCGACAACACCACAGTCTTGGACATCCGATCCCCCAACACCTTCGACAACAAGTACTACGTTGACCTCATGAACCGACAGGGCCTGTTCACCTCCGACCAAGACCTCTACACCGATAAGAGGACCAGAGACATTGTCACCAGCTTTGCCGTGAACCAGAGTCTCTTCTTTGAGAAGTTTGTGTTCGCCATGCTGAAGATGGGTCAGCTCAGTGTGCTCACGGGAAATCAAGGGGAGATTCGTGCCAACTGCTCCGTCAGGAATGCCAACAGCAAGGCCTTCTTGAGTTCCGTCGTGGAAAATGTGGCCCAAGAATTCATAGAAATGTAA 1074 0.4832 MASISSNNNAIFSFLLLSIILSVSVIQVCQAQPRPPTVRGLSYTFYSKTCPTLKSIVRTELKKVFKNDIAQAAGLLRIHFHDCFVQGCDGSVLLDGSASGPSEKDAPPNLTLRAESFRIIERIRGLLEKSCGRVVSCSDITALAARDAVFLSGGPDYEIPLGRRDGLTFASRQVTLDNLPPPSSNTTTILNSLATKNLDPTDVVSLSGGHTIGISHCSSFSNRLYPTQDPVMDKTFGKNLRLTCPTNTTDNTTVLDIRSPNTFDNKYYVDLMNRQGLFTSDQDLYTDKRTRDIVTSFAVNQSLFFEKFVFAMLKMGQLSVLTGNQGEIRANCSVRNANSKAFLSSVVENVAQEFIEM* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2110 357 CDD secretory_peroxidase 40 334 IPR033905 GO:0004601|GO:0042744
Vra8g2110 357 PANTHER PEROXIDASE 25-RELATED 31 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2110 357 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Vra8g2110 357 Gene3D Peroxidase, domain 2 181 316 - -
Vra8g2110 357 ProSiteProfiles Plant heme peroxidase family profile. 40 336 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2110 357 ProSitePatterns Peroxidases active site signature. 72 83 IPR019794 GO:0004601
Vra8g2110 357 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2110 357 PRINTS Plant peroxidase signature 74 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2110 357 PRINTS Plant peroxidase signature 115 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2110 357 PRINTS Plant peroxidase signature 134 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2110 357 PRINTS Plant peroxidase signature 153 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2110 357 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2110 357 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2110 357 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2110 357 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra8g2110 357 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2110 357 PRINTS Haem peroxidase superfamily signature 135 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2110 357 PRINTS Haem peroxidase superfamily signature 153 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2110 357 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2110 357 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2110 357 Pfam Peroxidase 57 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra8g2110 357 SUPERFAMILY Heme-dependent peroxidases 36 336 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra8g2110 357 PANTHER PEROXIDASE 31 339 - -
Vra8g2110 357 Gene3D - 44 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2110 Vra-Chr8 38908855 38911670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2110 11 357 Peroxidase AT1G71695 59.943 1.09e-158 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2110 K00430 - gmx:100775837 578.17