Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra8g2101 | ATGAGCTCGAAAGTTCCCTCCCCAGATTCAATTGATGCATTGAAGTCTAAAATGTCTGTTCAAAAGGACACAGATAAGTTCTTCATGTCAATCACTGAAGGAGAGAAAAAGCCATTTGACTTTTTACGTGTTCTATATGATGGTTGCATTGCTGGAGGTGTTGCGGGTGTCATGGTAGAGACAGCATTATACCCCATTGACACAATCAAAACTCGACTACAGGTTGCTCGTGATGGAGGAAAGATTGTTCTGAAGGGTCTGTACTCTGGATTGTCTGGAAATCTTGTTGGTGTCTTGCCAGNGTNTGCAATTTTTATTGGAGTGTATGAACCCACAAAGCAGCAATTGCTACAGTCATTGCCTGAGAATCTCAGTGNTGTGGCTCATTTTGCTGCAGGTGCTATTGGAGGCATTGCTTCTTCTNTTGTTCGGGTTCCAACTGAGGTTGTTAAGCAAAGGATGCAAATTGGGCAATTTAGATCAGCTCCAGATGNTGTTCGTCTCATTGTCTCAAATGAAGGTTTTAAAGGTCTTTATGCGGGATATGGTTCTTTCTTATTGCGAGATTTACCTTTTGATGCCATAGAATTATGCATTTATGAGCAGCTCCGTATTGGGTATAAATTAGCGGCAAAAAGAGATCCTAATGATCCAGAGAATGCTATGCTTGGGGCAGTGGCTGGTGCCATAACTGGAGCAGTCACAACTCCTCTTGATGTAGTAAAGACCAGATTGATGGTTCAGGGATCACAAAATCATTACAAAGGCATCAGTGATTGTGTGAGGACAATAGTTAAAGAAGAAGGAACTCATGCTCTTTTTAAGGGTATTGGGCCTAGAGTTTTGTGGATAGGAGTTGGCGGTTCAATATTTTTTTGTGCTCTTGAGAAGACAAAGCAAATACTTGCTCGGAATCGGCAAACCAAAGCTGAGATTCAGAAATGA | 945 | 0.4148 | MSSKVPSPDSIDALKSKMSVQKDTDKFFMSITEGEKKPFDFLRVLYDGCIAGGVAGVMVETALYPIDTIKTRLQVARDGGKIVLKGLYSGLSGNLVGVLPXXAIFIGVYEPTKQQLLQSLPENLSXVAHFAAGAIGGIASSXVRVPTEVVKQRMQIGQFRSAPDXVRLIVSNEGFKGLYAGYGSFLLRDLPFDAIELCIYEQLRIGYKLAAKRDPNDPENAMLGAVAGAITGAVTTPLDVVKTRLMVQGSQNHYKGISDCVRTIVKEEGTHALFKGIGPRVLWIGVGGSIFFCALEKTKQILARNRQTKAEIQK* | 315 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra8g2101 | 314 | PRINTS | Mitochondrial carrier protein signature | 129 | 142 | IPR002067 | GO:0055085 | |
Vra8g2101 | 314 | PRINTS | Mitochondrial carrier protein signature | 142 | 156 | IPR002067 | GO:0055085 | |
Vra8g2101 | 314 | PRINTS | Mitochondrial carrier protein signature | 181 | 201 | IPR002067 | GO:0055085 | |
Vra8g2101 | 314 | PRINTS | Mitochondrial carrier protein signature | 230 | 248 | IPR002067 | GO:0055085 | |
Vra8g2101 | 314 | PRINTS | Mitochondrial carrier protein signature | 274 | 292 | IPR002067 | GO:0055085 | |
Vra8g2101 | 314 | PANTHER | S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL | 9 | 310 | - | - | |
Vra8g2101 | 314 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 219 | 301 | IPR018108 | - | |
Vra8g2101 | 314 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 42 | 115 | IPR018108 | - | |
Vra8g2101 | 314 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 124 | 206 | IPR018108 | - | |
Vra8g2101 | 314 | PANTHER | S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN | 9 | 310 | - | - | |
Vra8g2101 | 314 | Pfam | Mitochondrial carrier protein | 48 | 117 | IPR018108 | - | |
Vra8g2101 | 314 | Pfam | Mitochondrial carrier protein | 124 | 204 | IPR018108 | - | |
Vra8g2101 | 314 | Pfam | Mitochondrial carrier protein | 219 | 305 | IPR018108 | - | |
Vra8g2101 | 314 | Gene3D | Mitochondrial carrier domain | 48 | 314 | IPR023395 | - | |
Vra8g2101 | 314 | SUPERFAMILY | Mitochondrial carrier | 49 | 296 | IPR023395 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra8g2101 | Vra-Chr8 | 38820770 | 38826970 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra8g2101 | 50 | 302 | Chloroplast and Mitochondria Gene Families | AT2G30160 | 32.384 | 8.05e-34 | 124 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra8g2101 | K15111 | - | gmx:100800051 | 521.931 |