Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2090 ATGGCGCGGGATGGGAGCGTCGTCCCTGCGGATCCGCAGGCGGTTGTAAAGAAGAAGACACAGTCGTCGAGAAGTTGGATTATGTTTGATGCTACAGGAAAGGGTTCATTGCTCGACGCAGACAAATATGCAATCATGCATCGGGTTCAGATTCATGCGCGTGATCTCAGAATCCTTGATCCCCTGCTTTCTTACCCTTCCACCATTCTCGGTCGTGAGAAGGCAATTGTTCTTAACTTGGAGCATATCAAGGCAATTATCACAGCTGAGGAGGTATTGTTGAGAGATCCAACAGATGAAAATGTGATCCCTGTTGTCGAGGAACTGCAAAGGCGGTTGCCTCAATCAAGTGCCGGTCTTCAACAGCAAGATGGAAAAGAGTACCTTGGTGGCCAAAATGATACTGAAGCAGCTGAAGATGATGAGTCACCCTTTGAATTCCGGGCCCTGGAAGTTGCTTTAGAAGCCATTTGCAGTTTTCTTGCTGCACGTACTACAGAATTGGAGATGGCTGCTTATCCTGCACTAGATGAACTTACCTCCAAGATTAGTAGTCGTAATTTGGACAGAGTTCGTAAACTGAAGAGTGCAATGACAAGGCTGACGGCTAGAGTACAAAAGGTCAGAGATGAGCTGGAACAATTGCTGGATGATGATGATGATATGGCTGACCTATACCTGTCAAGAAAAGCTGGTTCATTATCACCAGTCAGTGGAACTGGTGCTTCAAATTGGTTTGCTTCCTCCCCCACCTTAGGATCAAGGATATCTAGGGCAAGTAGAGCAAGTCTAGCAACAGTCCGTTTAGATGAAAATGATGTGGAAGAGCTTGAAATGTTACTAGAGGCTTATTTTAGTGAAATTGATCATACGATGAACAAATTAACCACACTGAGAGAGTACATTGATGATACTGAAGATTATATTAATATTCAACTTGACAGCCATCGTAATCAGCTCATTCAGTTAGAACTCTTTCTTAGCTCTGGAACTGTTTGCCTATCTTTCTACTCTTTGGTGACTGCTATATTTGGCATGAATATCCCATACACTTGGAACGACAACCATGATTACATGTTCAAATGGGTAGTTATTGTCTCGGGAGTACTTTCTGCTGTGATGTTTGTCATAATTACAGCCTATGCTCGCAATAAGGGATTAGTTGGATCGTGA 1173 0.4356 MARDGSVVPADPQAVVKKKTQSSRSWIMFDATGKGSLLDADKYAIMHRVQIHARDLRILDPLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPTDENVIPVVEELQRRLPQSSAGLQQQDGKEYLGGQNDTEAAEDDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKAGSLSPVSGTGASNWFASSPTLGSRISRASRASLATVRLDENDVEELEMLLEAYFSEIDHTMNKLTTLREYIDDTEDYINIQLDSHRNQLIQLELFLSSGTVCLSFYSLVTAIFGMNIPYTWNDNHDYMFKWVVIVSGVLSAVMFVIITAYARNKGLVGS* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2090 390 Coils Coil 274 294 - -
Vra8g2090 390 MobiDBLite consensus disorder prediction 114 141 - -
Vra8g2090 390 Gene3D Magnesium transport protein CorA, transmembrane region 104 320 - -
Vra8g2090 390 PANTHER MAGNESIUM TRANSPORTER MRS2-I 1 390 - -
Vra8g2090 390 MobiDBLite consensus disorder prediction 114 129 - -
Vra8g2090 390 Coils Coil 191 218 - -
Vra8g2090 390 Pfam CorA-like Mg2+ transporter protein 259 378 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vra8g2090 390 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 326 378 IPR045863 -
Vra8g2090 390 CDD Mrs2_Mfm1p-like 26 387 IPR039204 -
Vra8g2090 390 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 390 IPR039204 -
Vra8g2090 390 Gene3D - 12 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2090 Vra-Chr8 38717057 38721506 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2090 1 363 MRS2 Gene Family AT5G64560 79.620 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2090 K16075 - gmx:100810239 675.241