Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2077 ATGGGGTTACCATCCTCAGCATTAGACACTAGCTGGTGGGTGTTTACACTTCCAGCCATAGCAGGAACACAAAACTTAACTCACAACCCACTCTTGCTCATAATCCTCACTGCAATTCTTTCCATTGCCATCATGGCGTGGGCCTTCCCAAGAGGGGGAGGAGGTCTTGCATGGAGAAACGGAAAGAACCAAACGGGCCGGGTCCCTATACCCGGGCCAAAAGGAGTCCCTCTCTTCGGCCTCTTGTTTAGCTTAAACCATGCCCTACCTCATCGCACCCTCGCTTCCATTGCTTCAGCCCTATCAGCCACGAAACTCATGGCCTTCAGTTTGGGGTCAAGCCCAGTAGTTGTAACTTCCGACCCTCACGTGGCGCGTGAAATCTTGAACTCACCCCATTTCGCTGACCGCCCCATTAAACAATCCGCTAAGAACCTCATGTTCAACCGCGCCATTGGGTTTGCGCCAAACGGTGCGTATTGGCGCTTGCTGCGGAGGGTAGCCTCGACACACCTCTTCTCCCCACGCCGCATTCTTGCCCACGAGCCGGGTCGCTTGCTAGACTGCGCTGCCATGTTACGAGCTATAGCTCACGAGCAGTCCAAAAACGGGTTCGTGTGCCTAAGAAAACACCTCCAAGATGCAGCGCTGAATAACGTTATGGGAACTGTCTTTGGAAGAAGGTACCACGACCAAGATGAGTGTTATAATCGGCGTGAGATCGAAGAGGTGCGCGACATGGTCCGGGAAGGTTTTGACCTTTTGGGAGCTTTCAACTGGTCTGATTACGTTCCTTGGATCCGCTTCTTTTATGACCCTTTACGTGTTCGAGAACGGTGCTCCGTTCTTGCTCCGAGAGTGAAGAAATTTGTAAAGAGGATTCTGGAGGAGCACCGAATAATGGCTCCATTCAAAGAACTTTCTGATGACTCGGACTTCGTGGACGTGCTGCTCTCTCTAGAAGAGGATGACAAGCTCGAAGACGATGACATCATTGCTGTTTTATGGGAGATGATATTTCGTGGCACGGATACAGCAGCACTTCTTACTGAGTGGGTAATGGCCGAGCTTATTTTGAATGAGCAAGTGCAAACTAGGCTTCGCAATGAACTCCGCAGCGTTGTGGGAAAGAAGATGGTAGTTACAGATGCTGATGTGATAAAATTGCCATACTTAGAAGCCATAGTGAAAGAAACCCTGCGATTGCATCCAATTGGGCCTCTCCTTTCATGGGCCCGATTGTCCACGTCAGATGTCCATCTGAGCAATGGAATGGTGGTCCCAGCCAACACCACAGCAATGGTGAACATGTGGGCCATTACTCATGACCCTAGCGTGTGGCACGAGCCACTAGTGTTCAAGCCAGAGAGGTTTGTGAAGAGTGAAGGAGGGGTCGAAGTGGATATCAGAGGTGGTGACCTTAGACTCGCACCATTTGGAGCTGGACGCAGGGTTTGCCCCGGTAAAAACCTAGGGCTTGTGACCGTGAGCCTTTGGGTGGCTAACTTGGTTCATCGTTTTCATTGGTTTCAAGACATGGCTAACCCAGTTGACCTAGCCGAGGTTCTGAAACTATCTTGTGAAATGAAGAACCCTCTCAGAGCCCTGGCATCTCCAAGGTTTACTAATTAA 1632 0.5055 MGLPSSALDTSWWVFTLPAIAGTQNLTHNPLLLIILTAILSIAIMAWAFPRGGGGLAWRNGKNQTGRVPIPGPKGVPLFGLLFSLNHALPHRTLASIASALSATKLMAFSLGSSPVVVTSDPHVAREILNSPHFADRPIKQSAKNLMFNRAIGFAPNGAYWRLLRRVASTHLFSPRRILAHEPGRLLDCAAMLRAIAHEQSKNGFVCLRKHLQDAALNNVMGTVFGRRYHDQDECYNRREIEEVRDMVREGFDLLGAFNWSDYVPWIRFFYDPLRVRERCSVLAPRVKKFVKRILEEHRIMAPFKELSDDSDFVDVLLSLEEDDKLEDDDIIAVLWEMIFRGTDTAALLTEWVMAELILNEQVQTRLRNELRSVVGKKMVVTDADVIKLPYLEAIVKETLRLHPIGPLLSWARLSTSDVHLSNGMVVPANTTAMVNMWAITHDPSVWHEPLVFKPERFVKSEGGVEVDIRGGDLRLAPFGAGRRVCPGKNLGLVTVSLWVANLVHRFHWFQDMANPVDLAEVLKLSCEMKNPLRALASPRFTN* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2077 543 Gene3D Cytochrome P450 57 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g2077 543 PRINTS E-class P450 group I signature 100 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g2077 543 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g2077 543 PRINTS E-class P450 group I signature 330 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g2077 543 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g2077 543 PRINTS E-class P450 group I signature 393 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g2077 543 PRINTS E-class P450 group I signature 436 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g2077 543 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g2077 543 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g2077 543 PANTHER CYTOCHROME P450 FAMILY 78 PROTEIN 1 540 - -
Vra8g2077 543 PANTHER CYTOCHROME P450 78A7-RELATED 1 540 - -
Vra8g2077 543 Pfam Cytochrome P450 71 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g2077 543 SUPERFAMILY Cytochrome P450 70 540 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g2077 543 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 479 488 IPR017972 GO:0005506|GO:0016705
Vra8g2077 543 PRINTS P450 superfamily signature 341 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g2077 543 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g2077 543 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra8g2077 543 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2077 Vra-Chr8 38629435 38631921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2077 9 541 Cytochrome P450 AT5G09970 64.112 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2077 K20619 - pop:7464792 738.799