Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2053 ATGGGAATTTCTTCACACCCTTCTCTTGTCTCCCTCTCTTTGAAGGATCTGCTTGAAGCAAACAGGAATTCATCATACGGGTGTTTGAGAACCAAAAAGAAGGGTGTTAGGAGGCCAACTAGGAGGGTTTTGATGAAGAGAAGGGGTGGTTGTAGAAGAGGATCAAATGGGATTCGGAGACGCGTGAGAACATTGAAGACCCTTGTCCCTAACTCTCATTCTTTGGGGTTGGATGGACTCTTCAGAGAAACTGCTAATTACATATTGTCCTTACAAACGAGAGTGAGGGTCATGCAGGTTATGGTTAATGTATTGACACCTTCTCACGACTGA 333 0.4444 MGISSHPSLVSLSLKDLLEANRNSSYGCLRTKKKGVRRPTRRVLMKRRGGCRRGSNGIRRRVRTLKTLVPNSHSLGLDGLFRETANYILSLQTRVRVMQVMVNVLTPSHD* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2053 110 PANTHER TRANSCRIPTION FACTOR UPBEAT1 14 107 - -
Vra8g2053 110 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 14 107 IPR044660 GO:0006355
Vra8g2053 110 CDD bHLH_AtIBH1_like 47 102 IPR044549 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2053 18 109 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 44.792 2.13e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2053 - - vra:111242319 199.904