Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra8g2052 | ATGCAGAAGCATGGTTTTTCAGCGAAACGTAGCGTGTTACCGTATCAAACACCGAGACTAAGGGACCACTACGTTCTGGGGAAGAAGCTGGGACAAGGGCAATTTGGGACCACTTACCTTTGCACGCACAAGATGACGGGGAAGCTCTACGCATGCAAATCGATCCCGAAGAGGAAGCTTCTGTGTCAGGAGGATTATGATGATGTGTGGAGGGAGATCCAGATCATGCACCATTTGTCAGAGCATCCCAACGTTGTTCAGATACAGGGGACGTACGAGGATTCTGTGTTCGTGCACCTTGTGATGGAGCTGTGTGCCGGGGGTGAGCTTTTTGACAGGATCATTCAGAAGGGGCATTACAGCGAGAGAGAGGCTGCAAAGTTAATAAAGACCATTGTTGGGGTGGTGGAGGCGTGCCACTCTCTTGGTGTTATGCATAGGGATCTCAAGCCTGAGAATTTCTTGTTTGATACCCCTGGTGAAGATGCCCAGATGAAGGCCACGGATTTTGGCCTCTCTGTCTTCTACAAGCCAGGACAAGCCTTTCATGATGTAGTGGGAAGTCCGTACTATGTTGCCCCTGAGGTGTTGTGCAAGCACTATGGACCAGAAGTGGACGTATGGAGCGCTGGTGTTATCCTATACATCTTACTGAGTGGGGTGCCACCTTTCTGGGCTGAGAGTGAAGCAGGAATTTTCAGACAGATTATAAACGGAGAGCTTGATTTTGTTTCTGAGCCCTGGCCAAATATCTCAGAAAGTGCTAAAGAATTGGTAAAGCAGATGTTAGACAGGGACCCTAAGAAAAGAGTTTCTGCTCATGAAGTTTTATGTAACCCTTGGATTGTTGATGATATTGCACCTGACAGACCTCTGGACTCTGCTGTTTTGACACGCCTAAAGCATTTCTCAGCAATGAATAAACTTAAGAAGATGGCATTAAGGGTCATTGCTGAAAGACTTTCAGAGGAAGAAATAGGTGGATTGAAAGAGTTATTTAAAATGATTGACACAGACAACAGCGGGACAATAACTTTTGAGGAACTGAAAGAGGGTTTGAGAAGTGTGGGCTCTAATCTCATGGAATCTGAAATCAAATCCCTTATGGAGGCGGCTGATATAGACAACAGCGGAAGTATAGACTATGGTGAATTTCTTGCTGCTACACTGCACTTGAATAAGATGGAAAGAGAGGAGAATTTGGTTGCTGCTTTTTCCTATTTTGATAAAGATGGTAGTGGTTACATCACCATTGACGAGCTTCAGCAGGCTACCAAGGATTTTGGCCTTGGCGATGTACATCTAGATGAGATGATCAAAGAGATTGATCAAGACAATGATGGCAGAATTGATTATTCAGAGTTTGCAGCAATGATGAAAAGGGGTGATCCGAATGTTGGTAGAAGCAGAACCATGAAAGGCAATTTGAACTTCAATATTGCAGATGCTTTTGGAATGAAAGACCCTTCCTCTTGA | 1476 | 0.4485 | MQKHGFSAKRSVLPYQTPRLRDHYVLGKKLGQGQFGTTYLCTHKMTGKLYACKSIPKRKLLCQEDYDDVWREIQIMHHLSEHPNVVQIQGTYEDSVFVHLVMELCAGGELFDRIIQKGHYSEREAAKLIKTIVGVVEACHSLGVMHRDLKPENFLFDTPGEDAQMKATDFGLSVFYKPGQAFHDVVGSPYYVAPEVLCKHYGPEVDVWSAGVILYILLSGVPPFWAESEAGIFRQIINGELDFVSEPWPNISESAKELVKQMLDRDPKKRVSAHEVLCNPWIVDDIAPDRPLDSAVLTRLKHFSAMNKLKKMALRVIAERLSEEEIGGLKELFKMIDTDNSGTITFEELKEGLRSVGSNLMESEIKSLMEAADIDNSGSIDYGEFLAATLHLNKMEREENLVAAFSYFDKDGSGYITIDELQQATKDFGLGDVHLDEMIKEIDQDNDGRIDYSEFAAMMKRGDPNVGRSRTMKGNLNFNIADAFGMKDPSS* | 492 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra8g2052 | 491 | Gene3D | Transferase(Phosphotransferase) domain 1 | 110 | 288 | - | - | |
Vra8g2052 | 491 | SMART | serkin_6 | 24 | 282 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra8g2052 | 491 | CDD | EFh | 329 | 388 | IPR002048 | GO:0005509 | |
Vra8g2052 | 491 | ProSitePatterns | EF-hand calcium-binding domain. | 373 | 385 | IPR018247 | - | |
Vra8g2052 | 491 | Pfam | EF-hand domain pair | 329 | 389 | IPR002048 | GO:0005509 | |
Vra8g2052 | 491 | Pfam | EF-hand domain pair | 399 | 460 | IPR002048 | GO:0005509 | |
Vra8g2052 | 491 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 360 | 395 | IPR002048 | GO:0005509 | |
Vra8g2052 | 491 | Gene3D | Phosphorylase Kinase; domain 1 | 25 | 109 | - | - | |
Vra8g2052 | 491 | SMART | efh_1 | 434 | 462 | IPR002048 | GO:0005509 | |
Vra8g2052 | 491 | SMART | efh_1 | 364 | 392 | IPR002048 | GO:0005509 | |
Vra8g2052 | 491 | SMART | efh_1 | 400 | 428 | IPR002048 | GO:0005509 | |
Vra8g2052 | 491 | SMART | efh_1 | 328 | 356 | IPR002048 | GO:0005509 | |
Vra8g2052 | 491 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 9 | 473 | - | - | |
Vra8g2052 | 491 | SUPERFAMILY | EF-hand | 320 | 460 | IPR011992 | - | |
Vra8g2052 | 491 | Gene3D | - | 289 | 462 | - | - | |
Vra8g2052 | 491 | SUPERFAMILY | Protein kinase-like (PK-like) | 20 | 299 | IPR011009 | - | |
Vra8g2052 | 491 | ProSitePatterns | EF-hand calcium-binding domain. | 409 | 421 | IPR018247 | - | |
Vra8g2052 | 491 | CDD | STKc_CAMK | 23 | 281 | - | - | |
Vra8g2052 | 491 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 324 | 359 | IPR002048 | GO:0005509 | |
Vra8g2052 | 491 | ProSiteProfiles | Protein kinase domain profile. | 24 | 282 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra8g2052 | 491 | PANTHER | BNAA09G05220D PROTEIN | 9 | 473 | - | - | |
Vra8g2052 | 491 | ProSitePatterns | EF-hand calcium-binding domain. | 443 | 455 | IPR018247 | - | |
Vra8g2052 | 491 | ProSitePatterns | EF-hand calcium-binding domain. | 337 | 349 | IPR018247 | - | |
Vra8g2052 | 491 | ProSitePatterns | Protein kinases ATP-binding region signature. | 30 | 53 | IPR017441 | GO:0005524 | |
Vra8g2052 | 491 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 434 | 465 | IPR002048 | GO:0005509 | |
Vra8g2052 | 491 | Pfam | Protein kinase domain | 24 | 282 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra8g2052 | 491 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 144 | 156 | IPR008271 | GO:0004672|GO:0006468 | |
Vra8g2052 | 491 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 396 | 431 | IPR002048 | GO:0005509 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra8g2052 | Vra-Chr8 | 38357509 | 38361492 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra8g2052 | 11 | 491 | EF-hand Containing Proteins | AT4G09570 | 81.950 | 0.0 | 833 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Vra8g2052 | Pkinase | 3.3e-75 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra8g2052 | K13412 | - | gmx:547887 | 960.674 |