Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2035 ATGTCCGGGAACTCCAATTGCAGTGTTTACATAGGCAATCTAGATGAGAGGGTGACAGAGAGGGTCTTGTATGATATATTAATCCAAGCAGGACGAGTGGTAGATTTGCACATTCCTAAAGATAAGGAAACTGAGAAACCGAAAGGTTATGCCTTTGCAGAATATGAAACTGAGGAGATTGCAGATTATGCTGTCCGTCTTTTCTCGGGCCTTGTAACTCTCTATAACCGAACACTCAAGTTTGCAATGTCTGGGAGAGACAAGACTACCCTTAATGGCTCTACAGCAGTTACCCCCACATCAAATTCTTCTCAAAGGTCAAGGCCATATGCAGTCCCAATAAATAATTCAGAAAATTTTCAGCACCCTGCCAGGCTATCAACTTCTGATCGATATTCAGATTATGCAGTAAATCATTCCCAAGAAATGAGGATTTCAACCCAAAAAAGTTGCAAGGTGCCTTTGTTCTCTTACAATGAAGTAAATATGAATGGCAGAAGAACCAATTTAGCTTCAGAAAATTACCCCAAAGAAAGCGCGGAAAGATATGTTTGGCTTGAGAAAATATTATTTTACCCTTTTGTTAATATTTGTTAA 597 0.392 MSGNSNCSVYIGNLDERVTERVLYDILIQAGRVVDLHIPKDKETEKPKGYAFAEYETEEIADYAVRLFSGLVTLYNRTLKFAMSGRDKTTLNGSTAVTPTSNSSQRSRPYAVPINNSENFQHPARLSTSDRYSDYAVNHSQEMRISTQKSCKVPLFSYNEVNMNGRRTNLASENYPKESAERYVWLEKILFYPFVNIC* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2035 198 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 86 IPR000504 GO:0003723
Vra8g2035 198 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 80 IPR000504 GO:0003723
Vra8g2035 198 SMART rrm1_1 8 82 IPR000504 GO:0003723
Vra8g2035 198 PANTHER OS01G0876500 PROTEIN 1 178 - -
Vra8g2035 198 SUPERFAMILY RNA-binding domain, RBD 4 80 IPR035979 GO:0003676
Vra8g2035 198 Gene3D - 2 96 IPR012677 -
Vra8g2035 198 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 1 178 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2035 8 89 Eukaryotic Initiation Factors Gene Family AT1G49760 31.707 9.32e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2035 K12831 - gmx:100803118 260.766