Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2022 ATGGGTAAAGAGAAGGTTCATATTAACATTGTAGTGATTGGCCATGTGGACTCTGGAAAGTCCACTACCACGGGTCACCTCATCTACAAGCTTGGAGGTATTGACAAACGTGTGATAGAGAGATTCGAGAAAGAAGCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGAGCCTAAATTCTTGAAGAACGGAGATGCTGGTTTTGTGAAGATGATTCCCACAAAGCCCATGGTGGTTGAAACCTTCTCTGAATATCCCCCACTTGGTCGTTTTGCTGTGAGAGACATGCGTCAGACTGTGGCTGTTGGTGTCATCAAGAGCGTGGAGAAGAAGGATCCTACTGGAGCTAAGGTCACCAAGGCTGCACAGAAGAAGGGCAAGTGA 390 0.4692 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTGAKVTKAAQKKGK* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2022 129 PANTHER ELONGATION FACTOR 1-ALPHA 60 127 - -
Vra8g2022 129 PANTHER ELONGATION FACTOR 1-ALPHA 1 58 - -
Vra8g2022 129 Gene3D Translation factors 33 111 - -
Vra8g2022 129 PANTHER TRANSLATION FACTOR 60 127 - -
Vra8g2022 129 PANTHER TRANSLATION FACTOR 1 58 - -
Vra8g2022 129 Pfam Elongation factor Tu C-terminal domain 51 110 IPR004160 -
Vra8g2022 129 Pfam Elongation factor Tu GTP binding domain 6 43 IPR000795 GO:0003924|GO:0005525
Vra8g2022 129 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 42 110 IPR009001 -
Vra8g2022 129 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 54 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2022 Vra-Chr8 38061077 38062704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2022 1 58 Eukaryotic Initiation Factors Gene Family AT1G07930 98.276 3.30e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2022 K03231 - vra:106770620 260.381