Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2013 ATGGGAGAGGAAGTTTTACAGAGGAAGTTGGAGACAACTCCTACATGGGCTGTTGCAATTGTGTGCTTTGTCATGCTCGCTATTTCAATCCTCATTGAACATATTATTGAAGAACTTGGAAAGTGGTTGAAAAAGAAACACAAAAAGGCTCTTCATGAAGCGCTGGAAAAGGTTAAAGGAGAGCTTATGCTGCTGGGATTCATATCCTTGCTCCTAGTGGTGTTTGAAGATCGAATTACCTCTATCTGCATCTCAGAAAGTGTTGCTTCCACTTGGAATCCTTGCGATCCTGATTATAAGAGTAAAGGTCCAGAAGGATATATTGACAAATGCGCACAAAAAGATAAAGGAAAAGTTGCTTTTATCTCTGAATATGGGATTCACCAGCTCCATATATTCGTCTTTGTGCTTGCTATCTTTCACATCCTACAGTGCATCATGACACTGACTTTGGGTAGAACTAAGATGTCAATATGGAGGAAGTGGGAAGACGAAACGAAGAGTCTTGAACATCAGTTCTACCATGATCCTGAGAGGTTCAGGTTTGCTAGGGATACAACGTTTGGACGAAGGCACTTGAACTCATGGAGTAGATCACCAATTTCATTATGGATTGTTAGCTTCTGCAGACAATTCTATGGATCAGTTAATAAAGTTGACTATATGGCATTACGACATGGATTCATAGTGGCACATTTGACTCCAGCAAGTGAGACGAAATTTGACTTCCAGAACTATATAAAAAGAACACTTGATGAGGATTTTGCAGTAGTAGTTGGAATAAGTCCAACCATTTGGTTCTTTGCAGTGCTAATTCTGCTCACAAATACTAATGGGTGGTATTCTTATTTGTGGCTACCATTTATCCCACTAATTATAATCTTGTTGGTGGGAACAAAGCTACAAATGATCATAACAGATATGGCACTAAGGATTCAAGATAGGGGGGAAGTGGTCAAGGGTGCACCAGTGGTTGAGCCAGGAGATGAATTGTTCTGGTTCAGTCGCCCTCGCCTCGTTCTCTTTCTGATTCATCTCGTTCTGTTTCAGAATGCATTTCAATTGGCGTTTTTTGCTTGGAGCACTTACGACAATAAGTTCAAAATAAACAATTGCTTTCACCGCACTACTGAAGATATCGTCATCAGACTTACAATGGGGGTTCTCACCCAAGTTCTATGCAGCTACGTGACTTTGCCTCTTTATGCTCTAGTCACACAGATGGGTTCTACGATGAAACCCATCATTTTCAAAGATAACGTGGCATCAGCACTGAAGAACTGGCATCACACTGCTAAAAAGCATCTAAAACACAACAAGGATTCAACTTCTAACACCCCATTCTCAAGCAGACCAGGAACTCCAACTCATGGCATGTCTCCGGTGCACTTGCTTCACATGCACCCTAGACACAGTGATAGTCCACTGGTTTCTCCAAGAGCATCCAATTATGAAAATGGTCAATGGGATGTTGAAGGGTCACATTCCCCAAGCCACCATGCAAGAGATGTTGACCATGAAGAGAGCATGATGATGCAGCCTCAAGCAGCAGAATTGCCTCCTTCTGGACCCAATCCTATTCGAACTCAACATGAAATCAACATTGCTTTATCTGAATTTTCATTTGGGAGGGGACACAACCCCAGTAGAGCAGATGAGTATTAG 1665 0.418 MGEEVLQRKLETTPTWAVAIVCFVMLAISILIEHIIEELGKWLKKKHKKALHEALEKVKGELMLLGFISLLLVVFEDRITSICISESVASTWNPCDPDYKSKGPEGYIDKCAQKDKGKVAFISEYGIHQLHIFVFVLAIFHILQCIMTLTLGRTKMSIWRKWEDETKSLEHQFYHDPERFRFARDTTFGRRHLNSWSRSPISLWIVSFCRQFYGSVNKVDYMALRHGFIVAHLTPASETKFDFQNYIKRTLDEDFAVVVGISPTIWFFAVLILLTNTNGWYSYLWLPFIPLIIILLVGTKLQMIITDMALRIQDRGEVVKGAPVVEPGDELFWFSRPRLVLFLIHLVLFQNAFQLAFFAWSTYDNKFKINNCFHRTTEDIVIRLTMGVLTQVLCSYVTLPLYALVTQMGSTMKPIIFKDNVASALKNWHHTAKKHLKHNKDSTSNTPFSSRPGTPTHGMSPVHLLHMHPRHSDSPLVSPRASNYENGQWDVEGSHSPSHHARDVDHEESMMMQPQAAELPPSGPNPIRTQHEINIALSEFSFGRGHNPSRADEY* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2013 554 MobiDBLite consensus disorder prediction 495 509 - -
Vra8g2013 554 MobiDBLite consensus disorder prediction 432 528 - -
Vra8g2013 554 MobiDBLite consensus disorder prediction 476 493 - -
Vra8g2013 554 Pfam Mlo family 8 467 IPR004326 GO:0006952|GO:0016021
Vra8g2013 554 PANTHER MLO-LIKE PROTEIN 1 109 542 IPR004326 GO:0006952|GO:0016021
Vra8g2013 554 PANTHER MLO-LIKE PROTEIN 1 5 98 IPR004326 GO:0006952|GO:0016021
Vra8g2013 554 PANTHER MLO-LIKE PROTEIN 5 98 - -
Vra8g2013 554 PANTHER MLO-LIKE PROTEIN 109 542 - -
Vra8g2013 554 MobiDBLite consensus disorder prediction 442 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2013 Vra-Chr8 37956348 37961558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2013 5 544 MLO family AT2G39200 58.773 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2013 K08472 - gmx:100816112 943.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0399 3 4639250 4644174 Vra8g2013 8 37956348 37961558 ECH
Vra8g2013 8 37956348 37961558 Vra8g2013 8 37956348 37961558 ECH