Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2004 ATGCGGTCATTTCCTCTGGGAACTTCACTATCTCCTACTCCTATAAACACCTCAAAAATATCACCTTTCAACATTAATTTCAAGAAATCACTCACTTTTCCATATTGGGGTTCAACTTCTCCTCACGAATTCTCTTTCTCACAATCAGGAATATGTAGAGCAAGTCAAGTAGCTGATTTGTTCCCAACTGTGTCTCCAGAAATTATTGTGCGTGAGGCCAGGTTGGAGGACTGTTGGGAAGTGGCAGAGACTCACTGCAGCTCCTTCTTCCCTGAATATTCCTTCCCACTAGATTTTGTGCTGAGGATGGACAGATTGGTGGCCATGTTGGCAGGATTTACATTACCAAACGGTTGCAAGAGAACCTGTTTGGTTGCTGTTATTGGCAACTCACTTAGTGAAACTTTCTTGTTTGGAAGTGATGATTTCAAGGTTGGTGGTTTTGATGGGAAATTCAGCTTCAACAAGGGGTATGTGGCTGGTATATTAACAGTAGATACTGTTGCTGACTTTCTTCCTAGGAAGGGGCCCTTGCGGCAGAAAAGGACTGGAATTGCATACATATCAAATGTGGCAGTCCGGGAAAAATTTAGGCGGAAGGGAATAGCTAAACTCTTGGTAGCAAAGGCAGAATCACAAGCCAGAAGCTGGGGCTGTCGTGCAATTGCATTACACTGTGATTTCAAAAATCCTGCTGCCACAAAGTTATATCAAGGCCAAGGTTTCAGGTGTATCAAGGTTCCAGAAGGAGCTAACTGGCCACAGCCAAAGACCTCACCAGATATAAAGTTCAACTTTATGATGAAGCTTCTCAACAACTAA 822 0.4319 MRSFPLGTSLSPTPINTSKISPFNINFKKSLTFPYWGSTSPHEFSFSQSGICRASQVADLFPTVSPEIIVREARLEDCWEVAETHCSSFFPEYSFPLDFVLRMDRLVAMLAGFTLPNGCKRTCLVAVIGNSLSETFLFGSDDFKVGGFDGKFSFNKGYVAGILTVDTVADFLPRKGPLRQKRTGIAYISNVAVREKFRRKGIAKLLVAKAESQARSWGCRAIALHCDFKNPAATKLYQGQGFRCIKVPEGANWPQPKTSPDIKFNFMMKLLNN* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2004 273 Gene3D - 66 246 - -
Vra8g2004 273 Pfam Acetyltransferase (GNAT) family 157 242 IPR000182 GO:0016407
Vra8g2004 273 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 68 273 IPR000182 GO:0016407
Vra8g2004 273 CDD NAT_SF 184 225 - -
Vra8g2004 273 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 273 - -
Vra8g2004 273 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 62 247 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2004 Vra-Chr8 37792069 37796945 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vra8g2004 Acetyltransf_1 2.4e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2004 - - gmx:100305894 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2004 8 37792069 37796945 Vra8g2004 8 37792069 37796945 ECH
Vra1g1454 1 22445447 22448200 Vra8g2004 8 37792069 37796945 PCT