Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1991 ATGTGCAAATCCAGAAAGAGCACCGCTGCGGCACAACCAGAAAGCAGACGAAGCACAAACTCAAATAGAAGCATGACCAATTCCCCTCGTCCTCACCGGACGCAAACCCTAACATCGTCATCGTCGAACTACGATACCTCCACGAGCGAAGTCCCCGTCACAGAATCAAGAAGCTACGTATTCGAAAACAACAACACCAACACCAACGACTTATTAGAATGGTCAAAAACCTCTTCCATCTCAAGCCGCGCCTCTCTCTCAAGCCTTAAAGACACGCTCCCTGAAAGCCCTAACATCTACCACTTTTCAGAGATTTCCGCCGCCACCGCCAACTTCTCCGCCCCTCGCCTCTCTTCCTCCTCCTGGCGCTGCTTAATCCGCCACCGTGACGTTGTTGTCTCTCGCCGCAACTTCCGCCAACAAATCGACCTCCTGGAGCTCAGCCGCCGCCTCGCCATCATCTGCCGGAGTCACCACAGCAGCCTCGTCAAGCTCCTCGGCGCCTCCGTCTCCGGCGGCGTCATCTTTCTCGTTTACGAATTTGTCCCCGGCGCCAGCCTCGCCGATTGCCTCCGTAACCGCCGGAACCCTAGCCACACCGATCTCGTCACGTGGACCTCTAGGATGCAGATCGCCTCCGACATCGCGCATGGCCTCGATTACATCCACAATTTCTCCGGTTCAGACTCCGGTTCGGGATCCGGTTCTGGTTTCGTTCATAATCACATCAAGAGTTCCAGCATTGTTATCACGGAGGATGATTTGCGCGCGAAAATATGCCACTTCGGCTCGTCGCATCTCTGCGGCGAGGCGGTCGCTGGAACCGGTGAGGAATCCGGTGCGCGGAGGGTGAGGATCGAGGGGACGAGAGGGTACATGGCGCCGGAATTTCAGGTCAGCGGCGTAGCGACGAAGAAGAGCGACGTGTACGCGTTCGGCGTGGTGGTTTTGGAGCTGCTGAGCGGGGAAGAGGCGGTGAAATTCAAATTCAACGACGACGGCAGTTATCAGAGGACGAACGTGGTGGATACGGCGAGAATTGCGGCGGGGGAATATGGCGGTGTAAGGAAGTGGGTGGATAGGAGGCTGAGGGATTCTTTTCCGTTGAGTGTGGCGGAGAGGATGATTCGGGTCGGACTAGAGTGTGTCGGGAATGACCCGAATGAGAGACCCGACATGGGTCGGGTCTCGATTGAGGTGTCAAAGTTGTACCTGGAGTCGAAGGACTGGGATCAGAAAATGGGAACCGATATTGACTTGACGGTCTCGTTGGCCCCACGGTGA 1284 0.5623 MCKSRKSTAAAQPESRRSTNSNRSMTNSPRPHRTQTLTSSSSNYDTSTSEVPVTESRSYVFENNNTNTNDLLEWSKTSSISSRASLSSLKDTLPESPNIYHFSEISAATANFSAPRLSSSSWRCLIRHRDVVVSRRNFRQQIDLLELSRRLAIICRSHHSSLVKLLGASVSGGVIFLVYEFVPGASLADCLRNRRNPSHTDLVTWTSRMQIASDIAHGLDYIHNFSGSDSGSGSGSGFVHNHIKSSSIVITEDDLRAKICHFGSSHLCGEAVAGTGEESGARRVRIEGTRGYMAPEFQVSGVATKKSDVYAFGVVVLELLSGEEAVKFKFNDDGSYQRTNVVDTARIAAGEYGGVRKWVDRRLRDSFPLSVAERMIRVGLECVGNDPNERPDMGRVSIEVSKLYLESKDWDQKMGTDIDLTVSLAPR* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1991 427 Pfam Protein tyrosine and serine/threonine kinase 140 396 IPR001245 GO:0004672|GO:0006468
Vra8g1991 427 Gene3D Phosphorylase Kinase; domain 1 98 181 - -
Vra8g1991 427 Gene3D Transferase(Phosphotransferase) domain 1 183 422 - -
Vra8g1991 427 PANTHER OS09G0572100 PROTEIN 1 427 - -
Vra8g1991 427 PANTHER OS09G0572100 PROTEIN 1 427 - -
Vra8g1991 427 SUPERFAMILY Protein kinase-like (PK-like) 137 398 IPR011009 -
Vra8g1991 427 MobiDBLite consensus disorder prediction 1 59 - -
Vra8g1991 427 ProSiteProfiles Protein kinase domain profile. 74 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra8g1991 427 MobiDBLite consensus disorder prediction 8 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1991 Vra-Chr8 37628041 37629893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1991 95 415 Receptor kinase-like Gene Family AT1G51940 32.653 6.29e-45 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vra8g1991 PK_Tyr_Ser-Thr 9.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1991 - - gmx:100820374 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1991 8 37628041 37629893 Vra8g1991 8 37628041 37629893 ECH