Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1984 ATGAAAAATTCTGTTTCAGAGAACAGTTTTATCATCGAGAGTGATGAAGAGGATGTGGAGAAGGATTTGAACAAAGGTGGAGGTGATGGTAACGATTCTGATTCTTCTAGTTACTCAACTGAAAACCCTCCACAGCGAAAGCCCAGTTCTTACAACATCTCGTGGCCACAGAGTTACAGGCAATCTATTGATCTATACAGTAGTGTGCCATCACCAAACATTGGATTTTTGGGCACATCCTCATTGTCAAGACTAAGCAGCTCTTTCCTTTCTACATCACTAACAAGGAGGCACACTCCTGAAGCACTTCCTTCAGTGACAAAGCCTCTTTTACAAGAACCAGAAGATGAGCAGCATCAGAGACGTAGCTCTCACACCTTGCTTCCTCCTCTTTCTTCTAGAAGATCTTCTTTGATTAAGAAGGACTCCAAGGTTTCTCATGAAGTTCCCTCTCGCAACTGCTCTTTTGGACAATCTGTGTTCAATGGCATAAATATTCTTTGTGGTGTTGGAATCCTTTCTACCCCTTATGCTGCCAAAGAAGGTGGATGGTTTGGGCTCTCAGTCTTGTTTCTTTTTGCAATTATTTCATTTTATACTGGGCTGCTCTTGCGTTCCTGTTTGGACAGTGATCCTGAGCTTGAAACATACCCTGATATTGGCCAAGCTGCTTTTGGTACTACTGGACGTATTGCAATTTCAATAGTGTTGTACGTGGAATTATATGCTTGTTGCATTGAATATATAATTTTGGAGGGCGACAACTTGTCTTCCTTGTTTCCAAATGCACACTTGAATTTGGGTGCAATTGAACTGGATTCACATACACTTTTTGCTGTGCTTACTGCCTTGACTGTTCTTCCTACTGTTTGGCTCCGTGATCTAAGAATTCTCAGTTACATATCTGCTGGTGGAGTTATTGCATCCATTTTGGTGGTTCTCTGCTTGTTATGGGTTGGAGTAGACAACGTAGGATTTCATAGCAAAGGGACCACACTCAATCTTGCAACTTTTCCTGTTGCTGTGGGTCTCTATGGTTACTGCTACTCTGGACATGCTGTTTTCCCGAACATTTATTCATCCATGGCAAATAAAAACCAATTCCCTGGAGTGCTCTTAGCATGTTTTGGTATTTGTAGCTTATTGTATGCTGGAGCTGCTGCTATGGGATACACAATGTTTGGTGAAGCTATACTCTCTCAATTCACTCTCAACATGCCTCAAGAATTGGTAGCAACCAAAATTGCTGTTTGGACCACGGTGGTTAATCCACTTACCAAATTTGCATTGACTATATCCCCGGTGGCAATGAGTCTAGAGGAGTTGATACCATCAAACCATACCAAATCTTTTCTATATTGCTTCTTCATCAGAACAGGGTTGGTACTTTCCACCCTCGTTATTGGTCTCTCAGTTCCCTTTTTTGGTCTCGTTATGTCATTGATTGGATCATTATTCACAATGCTTGTTTCTTTGATACTACCCTGCGTTTGTTTCCTGAAAATCTTGCGAGGCAAAGTGACACGATTGCAGGCAGCACTTTGTGTTACAATCATCATGGTAGGAGTTGTCTGTTCTTCTTTTGGAACATACTCTGCCCTCTCCGAGATTATTAAGAGTTTGAGGGGATGA 1632 0.4173 MKNSVSENSFIIESDEEDVEKDLNKGGGDGNDSDSSSYSTENPPQRKPSSYNISWPQSYRQSIDLYSSVPSPNIGFLGTSSLSRLSSSFLSTSLTRRHTPEALPSVTKPLLQEPEDEQHQRRSSHTLLPPLSSRRSSLIKKDSKVSHEVPSRNCSFGQSVFNGINILCGVGILSTPYAAKEGGWFGLSVLFLFAIISFYTGLLLRSCLDSDPELETYPDIGQAAFGTTGRIAISIVLYVELYACCIEYIILEGDNLSSLFPNAHLNLGAIELDSHTLFAVLTALTVLPTVWLRDLRILSYISAGGVIASILVVLCLLWVGVDNVGFHSKGTTLNLATFPVAVGLYGYCYSGHAVFPNIYSSMANKNQFPGVLLACFGICSLLYAGAAAMGYTMFGEAILSQFTLNMPQELVATKIAVWTTVVNPLTKFALTISPVAMSLEELIPSNHTKSFLYCFFIRTGLVLSTLVIGLSVPFFGLVMSLIGSLFTMLVSLILPCVCFLKILRGKVTRLQAALCVTIIMVGVVCSSFGTYSALSEIIKSLRG* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1984 543 PANTHER OS05G0424000 PROTEIN-RELATED 28 540 - -
Vra8g1984 543 PANTHER - 28 540 - -
Vra8g1984 543 MobiDBLite consensus disorder prediction 100 130 - -
Vra8g1984 543 MobiDBLite consensus disorder prediction 29 53 - -
Vra8g1984 543 Pfam Transmembrane amino acid transporter protein 153 532 IPR013057 -
Vra8g1984 543 MobiDBLite consensus disorder prediction 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1984 Vra-Chr8 37564976 37571398 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1984 1 476 Amino Acid or Auxin Permease AAAP Family AT2G39130 69.421 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1984 K15015 - gmx:100775840 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1984 8 37564976 37571398 Vra8g1984 8 37564976 37571398 ECH