Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1954 ATGAAGCTTTCGTTTTCCGTCCCCTCATCGAAATCCCAATCGAAACCCAAACCCATCAATACCTTAGACGACACTTCCACCGCCCAAAACGACGCTGACGGATCCAAACATCTCATCACCGAATTCGATCCTTCCAAACCCGCTCCCTCCCTCGCCCCCAAAATCCTAATTCAGCCAATCCAAAACGAATGGAAACCCTTTAAGAAGATGAAGAACCTCCACCTCCCCACCGCCGACCCTGAATCCGAACCCCTTACATTCGAAGTCCACGCCGTCGACGGCCAACCCGACTCCGACGTCTCCTATGGCCTCAACCTCCGCACCGACAAAAAAACTGAGCAAAACAACAGCATCGCACTTCCGCCGCCGCCGCGCCGCGTTCCGGTGGACGGTACGATGCTGCAGAAGCTGAAGGACGACATGGAGAGGTTACCGGAGGATCGGGGGTTCGACGAGTTCAAGGATGTCCCAGTCGAGGGTTTTGGCGCGGCGCTGCTGGCCGGCTACGGGTGGAAGGAAGGGATGGGGATTGGAAAGAACGCGAAGGAGGACGTGAAGATTACTGAGATCAAGCGGAGAACTGCTAAGGAAGGATTGGGTTTTGTTGGTGATGCTCCTGCTGCGCTGGTTCGGAGTAGCAATGACAAGGACAAGAAGAAGAATGAGAAGAAGGAGAAGGTTGTTAGGGTTGTTGGGGGAAGAGATGCTGGGAGGAAGGGTACTGTTGTGTCTAGTATCGGTGATGATTATCTTGTTTTGGAGCTATCCAGAAGTGAAGAGAAGGTGAAAGTGAAGGTGGGGGATGTTGCTGAATTGGGTTCTAAGGATGAAGAGAGGTGTTTGAGGAAATTGAAGGAGTCGAAGATTCAGCGTGAGGATAGAGGGCCAAAAAGGAAGCGCGACAGGGATGAGTTGGAGAATAGAGTGGATGTTAGTCGGAGAGAGGAGAGGAAAGGGGTGGGTCGTAGGGATATGGTTGAGGAGAAGAGAATGGATGGTGGTAGGAGAGAGGAGAGGAGAGTGGTGGATCAGAGGAAGGTTTCTTGGCTTACTAGTCACATTCGGGTGAGGGTGATTAGCAGGGATTTGAAAGGAGGGCGGTTGTATTTGAAGAAGGGGGAGATTCTGGATGTTGTTGGACCTACCACTTGTGATGTATCAATGGATGAGAGCAGGGAGATTGTTCAAGGGGTGTCCCAAGATTTTCTGGAGACGGCAATTCCGAAACGTGGGGGACCTGTGCTTGTGTTGGCTGGTAAATACAAGGGTGTATTTGGGAGTCTGGTGGAGAGGGATTTGGAGCGGGAAATGGCCATTGTTAGGGATGCTGATACCCATGAGCTGCTAAATGTGAAGCTTGAGCAAATTGCGGAGTATATAGGGGACCCAAGCTTGTTGGGACATTGA 1407 0.516 MKLSFSVPSSKSQSKPKPINTLDDTSTAQNDADGSKHLITEFDPSKPAPSLAPKILIQPIQNEWKPFKKMKNLHLPTADPESEPLTFEVHAVDGQPDSDVSYGLNLRTDKKTEQNNSIALPPPPRRVPVDGTMLQKLKDDMERLPEDRGFDEFKDVPVEGFGAALLAGYGWKEGMGIGKNAKEDVKITEIKRRTAKEGLGFVGDAPAALVRSSNDKDKKKNEKKEKVVRVVGGRDAGRKGTVVSSIGDDYLVLELSRSEEKVKVKVGDVAELGSKDEERCLRKLKESKIQREDRGPKRKRDRDELENRVDVSRREERKGVGRRDMVEEKRMDGGRREERRVVDQRKVSWLTSHIRVRVISRDLKGGRLYLKKGEILDVVGPTTCDVSMDESREIVQGVSQDFLETAIPKRGGPVLVLAGKYKGVFGSLVERDLEREMAIVRDADTHELLNVKLEQIAEYIGDPSLLGH* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1954 468 SMART G-patch_5 156 202 IPR000467 GO:0003676
Vra8g1954 468 MobiDBLite consensus disorder prediction 1 52 - -
Vra8g1954 468 MobiDBLite consensus disorder prediction 288 331 - -
Vra8g1954 468 PANTHER G PATCH AND KOW-CONTAINING 1 466 IPR045166 GO:0000398
Vra8g1954 468 Gene3D - 353 407 - -
Vra8g1954 468 ProSiteProfiles G-patch domain profile. 158 204 IPR000467 GO:0003676
Vra8g1954 468 Pfam G-patch domain 145 201 IPR026822 -
Vra8g1954 468 MobiDBLite consensus disorder prediction 1 34 - -
Vra8g1954 468 MobiDBLite consensus disorder prediction 109 130 - -
Vra8g1954 468 SMART kow_9 407 434 IPR005824 -
Vra8g1954 468 SMART kow_9 221 248 IPR005824 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1954 345 441 C2H2 Transcription Factor Family AT1G55460 32.990 1.41e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1954 K13101 - gmx:100784983 645.195