Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1875 ATGAAGATGGGAATTGCAGTGGCAGGTGTTGATGTGTTGAGTGAAAAAGCGGCGATGATGAGAGAGTCTCTGCAGAAGAGTCAAACCATCGCAGACAACGTCGTCACCATTCTAGGCTCCTTCGACCACCGTCTCTCGGCACTTGAAACTGCCATGCGTCCAACTCAGATTAGAACTCATTCCATTAGGAAGGCTCATGAGAATATTGATAGGACTTTGAAGGCTGCGGAGGTTATATTGGCTCACTTTGATCAATATCGTCAGGCTGAGGCAAAAATACTTAAAGGGCCACATGAAGACTTGGAAAACTATCTTCAAGCAATTGAAAACCTGAGAAGCAACATCCAGTTTTTTGGCAGTAAGAAGGGTTTTAAGAGCACTGATGGCATTGTTGTTCATGCTAATAATCTGTTAACTAAGGCTATTTCAAAGCTAGAAGACGAGTTTAGGCAGTTATTATTATCTTACAGCAAACCTGTGGAACCTGAGCGCCTCTTTGACTGCCTTCCAAACTCAATGCGACCTTCATCAGGATCACCTCACCATGAGGGTGATCCCAGTGGCAAGATACCTTCTAATCACCATTCTGAGTCTCACAACAATAATGCCGATGCTGTTGTATATACCCCTCCCGCTCTTATACCACCAAGATTTTTGCCACTGCTACACGATTTAGCTCAGCAAATGGTTGAAGCTGGTCACCAACAACAGTTACTCAAAATATACAGGGATGCCCGTTCTAATGTATTGGAAGAGAGCCTTCAAAAACTTGGAGTTGAAAAACTCAACAAAGATGATGTTCAAAAGCTGCAATGGGAGATCTTGGAAGCTAAAATTGGAAACTGGATTCATTTCATGCGTATAGCAGTGAAATTGTTGTTTGCTGGTGAGAGGAAAGTTTGCGATCAGATATTTGAAGGCTTTGATTCACTCAGTGAACAGTGCTTTGCTGAGGTGACGAAAAACAGTGTTTCTATGCTACTCAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCCCCAGAAAAGTTATTTGTACTTCTGGACATGTACGAAATAATGCAAGAGCTTCATTCTGAGATTGAAACTCTTTTTAAAGGCGAAGCTTGCTCTGGAATAAGAGAAGCTGCAACTGGTCTGACAAAACGTCTTGCACAAACAGCCCAAGAAACCTTCGGAGATTTTGAAGAGGCAGTTGAGAAAGATGCTACCAAGACTGCTGTAACAGATGGAACTGTCCATCCTCTGACAAGCTATGTTATTAATTATGTGAAGTTTTTATTTGACTACCAATCCACCTTGAAGCAACTTTTTCAGGAATTTGAAGGGGGTAATGATTCTTCACAACTAGCATCTGTAACAGTGCGAATAATGCAAGCTTTGCAAACTAATTTAGATGGGAAATCAAAGCAGTATAAAGACCTTGGATTGACACATCTTTTTCTCATGAACAATATTCATTACATTGTCAGATCGGTTCGAAGATCTGAAGCCAAGGATTTACTGGGAGACGATTGGGTACAACGACACAGGAGGATTGTGCAGCAGCATGCTAATCAATACAAGAGAAATGCCTGGGCAAAGATTCTTCAGTGCCTTTCTATTCAGGGCCTTACCTCCTCAGGTGGTGGAAGTGGTACTGCTGGTGGTGATGGTGCAACTGGAAGCAGCAGTGGTGCTTCAAGAGCAATTGTTAAAGACCGGTTTAAGGCATTCAATGTAATGTTTGAGGAACTTCATCAAAAACAATCTCAATGGACAGTTCCGGACACCGAGTTGCGAGAGTCTCTCAGGCTTGCAGTTGCTGAAGTCTTGTTGCCTGCCTATAGATCCTTTGTCAAACGATTTGGGCCACTAGTGGAGAGTGGAAAGAATCCTCAGAAGTATATAAAATACACTGCAGAAGATTTAGACCGAATGCTGGGTGAATTTTTTGAAGGAAAAAACATGAGTGAAACTAAACGATGA 1968 0.4207 MKMGIAVAGVDVLSEKAAMMRESLQKSQTIADNVVTILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDRTLKAAEVILAHFDQYRQAEAKILKGPHEDLENYLQAIENLRSNIQFFGSKKGFKSTDGIVVHANNLLTKAISKLEDEFRQLLLSYSKPVEPERLFDCLPNSMRPSSGSPHHEGDPSGKIPSNHHSESHNNNADAVVYTPPALIPPRFLPLLHDLAQQMVEAGHQQQLLKIYRDARSNVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSEQCFAEVTKNSVSMLLSFGEAIAKSKRSPEKLFVLLDMYEIMQELHSEIETLFKGEACSGIREAATGLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYQSTLKQLFQEFEGGNDSSQLASVTVRIMQALQTNLDGKSKQYKDLGLTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLTSSGGGSGTAGGDGATGSSSGASRAIVKDRFKAFNVMFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKNPQKYIKYTAEDLDRMLGEFFEGKNMSETKR* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1875 655 Gene3D Exocyst complex component Exo70 77 181 - -
Vra8g1875 655 Gene3D Exocyst complex component Exo70 188 655 - -
Vra8g1875 655 PANTHER EXOCYST COMPLEX PROTEIN EXO70 37 651 IPR004140 GO:0000145|GO:0006887
Vra8g1875 655 MobiDBLite consensus disorder prediction 167 202 - -
Vra8g1875 655 Pfam Exo70 exocyst complex subunit 281 642 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vra8g1875 655 SUPERFAMILY Cullin repeat-like 79 646 IPR016159 -
Vra8g1875 655 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 37 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1875 Vra-Chr8 36068549 36076443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1875 10 655 EXO70 exocyst subunit family AT5G03540 75.037 0.0 993
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1875 K07195 - gmx:100813987 1184.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1875 8 36068549 36076443 Vra8g1875 8 36068549 36076443 ECH