Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1866 ATGAGTTCATCCAACCACTTCAACCAGGGCAGCAGATTTTTAGCAAGTAAGCCAAGGAATGAGGTTGATGCTAAAGAAGAAATCTTCAGAATTGAAGGAAACACAACATTTGCGACAAACTATGGACGTTGGTTGGAAAAACACAATAAACTTATTTGTGAGATACGGAGTGCTTTAAATGATGAAGTTGTTGATGACAAACTAGTGTTTCTTATAGATATTTCATTGAAGCACTATTTGGAATTCTCAGAAATGAAAACAAGTGATGTCAGCAATGTTGCTTGGTGCACAGCAGCTGACCAAAGTCTGTGGTGGATTGGAGGATTTCGCCCTTCTAAACTGCTCCAGGTTATTGTGCCTCAACTTCAACATTCGTGTTCTCAGCAGCAACTTTCTGATATTTGCAATCTTGTACAATCATGTGAACAAGTAGAATATGCTCTTGCACGAGGCATGGAGAAACTTCACCAAATCCTTCATAATGCAACAACAGAAGGTGAGAGAGGATTAAAACTGACGTCTGCCCCACAACAAATGAGATTTCTAAAGCAGGCGAATGATGTTCGACAGGAATTTTTGCATCGACTATGTGGTCTGCTCACAAATAGTCAGTATGCAGAATTCTTACTTTGTTTGGGGGAATGCCTCTATAATCCTTCCAGCTCACTTTGA 672 0.3988 MSSSNHFNQGSRFLASKPRNEVDAKEEIFRIEGNTTFATNYGRWLEKHNKLICEIRSALNDEVVDDKLVFLIDISLKHYLEFSEMKTSDVSNVAWCTAADQSLWWIGGFRPSKLLQVIVPQLQHSCSQQQLSDICNLVQSCEQVEYALARGMEKLHQILHNATTEGERGLKLTSAPQQMRFLKQANDVRQEFLHRLCGLLTNSQYAEFLLCLGECLYNPSSSL* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1866 223 PANTHER TRANSCRIPTION FACTOR TGA9 1 220 - -
Vra8g1866 223 PANTHER FACTOR BZIP PROTEIN, PUTATIVE-RELATED 1 220 - -
Vra8g1866 223 ProSiteProfiles DOG1 domain profile. 34 223 IPR025422 GO:0006351|GO:0043565
Vra8g1866 223 Pfam Seed dormancy control 52 119 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1866 Vra-Chr8 36007868 36016077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1866 33 214 Calmodulin-binding Proteins AT5G10030 39.394 2.83e-39 137