Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1857 ATGTTAGATCTTAATGAGACTCCTCCAGAAGAAATGCAAGGTGGAGCTTCTGAAAGATATTCAAGAAGCAGAAATCAACCAGACGCTGAATATATTTGGACCAATTTATCAGAAGAGCAGAAGCTTGTTGCATCAAACAGTTTCAATGTTTATTGCCAGCCTTTAGTAATCTACAACGAAATCCAGTCTCGCCCAAGATTCCTTCAGAGATGCTTGTACCACAACAGAAAGGCTAAGCACAAGAAGAGGATTCTAATGACAGTTTTGCTGTCGTGGAAAGTAGAAGAAGTTCAATCTCTTTTTCCCATGTGTATCTGTCTGGGAAGGCTGTTGGATCCAAACGAGGAACACACAGGGGAAGAAAAGTATGATGTTCGTCGGATATTCACATTTGAAGGTCCAACTGGAATTGATTGGAATGGAATTAATCATGTCCGAGTAAACTTTATGCTTCCTCATATCGAAAAGTTAGCTGTGGAAACTAATTATGACAAATATTTTCTCTTCATTCTCGCTTCTGCGAAAAACCCAATTTCATTGTCTACAGTCAATGCAAGCACGTTGACTTCGGAGGTGGCTTCTAATGAATCATCTGGTGGAGAGAAATGCTTTTATGGAAAAGTGTCTCTGAAATTTCTTTACAAGATTTTGAATATATCTCCAGATTCTCCTTTGCAATATCGAACTGAGATTCAATTTAGCACTGAACTTCGTTCTTGTAATTTGAAGTATTGGTTGAAACATTATACTCGAACAACAAGCAGCACCATCTCTATTAAAGATTCTAATGATTCAGAGGGTATATCAAAGAAACTTGAAATCTCAGCTGGTTTTGAAGAATTTGGAGCAGCTATGGAAGCAGCTTCTGGTAGGACACAGGAAAGGAGAGAAGAGTCATCTTTGTCTTCTTTCTTACTTCATTTCACTTGGTCACCAGGAATTGTCTCATTTTATTACAGGTATTACCATAACATGTTGCACAGACTCGAAGTTACTGAGAATTTCACCTGTGCAATCTGTTTGGTACAATGTATAAACTATAAGAGCTTAAAAATCCACCTAAGGTTATCACACCCGATATTTAGGTTTGAATTTTCGGAATCAGAGGAATTTCTATCGGTATATGTGTCTGTGAAGAACGAAAACTGGTGGCGAGAGTTGATTGATCCAAAAGTTGATACTTTTATGTACTGGTAA 1197 0.3776 MLDLNETPPEEMQGGASERYSRSRNQPDAEYIWTNLSEEQKLVASNSFNVYCQPLVIYNEIQSRPRFLQRCLYHNRKAKHKKRILMTVLLSWKVEEVQSLFPMCICLGRLLDPNEEHTGEEKYDVRRIFTFEGPTGIDWNGINHVRVNFMLPHIEKLAVETNYDKYFLFILASAKNPISLSTVNASTLTSEVASNESSGGEKCFYGKVSLKFLYKILNISPDSPLQYRTEIQFSTELRSCNLKYWLKHYTRTTSSTISIKDSNDSEGISKKLEISAGFEEFGAAMEAASGRTQERREESSLSSFLLHFTWSPGIVSFYYRYYHNMLHRLEVTENFTCAICLVQCINYKSLKIHLRLSHPIFRFEFSESEEFLSVYVSVKNENWWRELIDPKVDTFMYW* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1857 398 ProSitePatterns Zinc finger C2H2 type domain signature. 337 358 IPR013087 -
Vra8g1857 398 MobiDBLite consensus disorder prediction 1 23 - -
Vra8g1857 398 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 33 397 - -
Vra8g1857 398 PANTHER POLYCOMB GROUP PROTEIN 33 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1857 Vra-Chr8 35906763 35912264 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1857 50 397 C2H2 Transcription Factor Family AT5G51230 32.033 1.01e-50 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1857 - - vra:106770592 774.622