Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1848 ATGGGAGAGGTGAAGCTACATGGGTTTTGGTACAGTCCGTTCGCATTGAGGGTGAAGTGGAGCTTAAAGCTGAAAGGTATTGAGTATGAGAACATTGAAGAGGATCGATTCAACAAAACTCCTGAACTCCTTCAGTACAATCCTGTCTACAAGAGAATCCCCGTTTTGGTTCATGCTGGAAAACCCATTTCTGAATCCATGATCATAATCGAATACATCGATCAAGTTTGGCCTCAACATCCACTCTTACCTTCTCATCCCTACGACAAAGCTCTCGCACGCTTTTGGGTCAAATACTCTGATGATCTGACCGAGGGAGTTAGAGCACTCTATCGTAGCAAAAATGCGGAAGATAGGAAGAAGGTGATAGAGGATATTATTTGGGAGCATTTCAGAGTTGTGGAAGATCAGTGTTTTGGTAAGGAAAAGAAATTCTTTGGAGGAGAGAGTGTTAATGTTGTGGACTTGGCTTATGGGTCCATCATCAAATATATTACTGTGTTGGAAGATATCTTTGAAGAGCATATTCTTCAAGCACAGAAATTCCCTCGTTTGTATACATGGTTTAATATCTTCAAATCTGAACCAACCATCGCAGAAATCTTACCTGACCAGGATCAAATGGTAGCTTTTCTTAAAACTCTCAGAGAACGAGTTCTGGCATCTTCGTGA 672 0.4122 MGEVKLHGFWYSPFALRVKWSLKLKGIEYENIEEDRFNKTPELLQYNPVYKRIPVLVHAGKPISESMIIIEYIDQVWPQHPLLPSHPYDKALARFWVKYSDDLTEGVRALYRSKNAEDRKKVIEDIIWEHFRVVEDQCFGKEKKFFGGESVNVVDLAYGSIIKYITVLEDIFEEHILQAQKFPRLYTWFNIFKSEPTIAEILPDQDQMVAFLKTLRERVLASS* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1848 223 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 217 - -
Vra8g1848 223 CDD GST_N_Tau 4 77 - -
Vra8g1848 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 217 IPR045073 -
Vra8g1848 223 CDD GST_C_Tau 87 215 IPR045074 GO:0004364|GO:0006749
Vra8g1848 223 SUPERFAMILY GST C-terminal domain-like 75 218 IPR036282 -
Vra8g1848 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vra8g1848 223 Pfam Glutathione S-transferase, C-terminal domain 107 200 IPR004046 -
Vra8g1848 223 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
Vra8g1848 223 SFLD Main (cytGST) 1 222 - -
Vra8g1848 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 212 IPR010987 -
Vra8g1848 223 SFLD Main.3: Omega- and Tau-like 1 222 IPR045073 -
Vra8g1848 223 SUPERFAMILY Thioredoxin-like 4 102 IPR036249 -
Vra8g1848 223 Gene3D Glutaredoxin 1 82 - -
Vra8g1848 223 Gene3D - 83 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1848 Vra-Chr8 35835019 35835956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1848 4 222 Glutathione S-transferase Gene Family AT3G09270 40.090 5.10e-51 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1848 K00799 - gmx:547584 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1848 8 35835019 35835956 Vra8g1848 8 35835019 35835956 ECH