Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1847 ATGGGAGAGGTGAGGCTTCATGGATTTTGGTACAGTCCCTTTACTTTAAGGGTGGTATGGACCTTGAAGTTAAAGGATATAGCATATGAGAATATAGAGGAAGATCGGTACAACAAGAGTGTTAAACTTGTTGAATACAACCCAGTGCACAAGAAAACTCCAGTGCTAGTTCATAATGAAAAACCTTTATGTGAGTCTATGATTATTGTTGAATACATAGATCAGATTTGGCCACACAACCCATTGCTTCCTTCTCATCCCTACAACAGAGCTTTGGCACGCTTTTGGGTTAATTATACTGAAGAAATGTTTTCTGCAGGTGTGAAATTCTTCCGTAGCAATACTGATGAAGAACGAGAAAAGAGCATAGAGAATCTATGGAAGCATTTCATGGTTGTTGAGAATAAGTGTTTTGGTGATGAGAAGAAAATATTTGGGGGAGAAATTATTAACATTGTGGACATAGCTTTTGGGTCCATCTTCAAATTTTTTGAGGTTGCAGAAGATGTTATTGGAGCGAAGGTCCTTCAAGATGACAAATTTCCTCAGCTGTGTTCCTGGTATAATAATTTCAAGAATCTTCCTGTTATTAAAGAAAATCTCCCAGACCACGAGAAAATGGTAGCTTTTGTTAAGATTATTAGAGAAAAAAACATGGCATCTTCCTAA 669 0.3707 MGEVRLHGFWYSPFTLRVVWTLKLKDIAYENIEEDRYNKSVKLVEYNPVHKKTPVLVHNEKPLCESMIIVEYIDQIWPHNPLLPSHPYNRALARFWVNYTEEMFSAGVKFFRSNTDEEREKSIENLWKHFMVVENKCFGDEKKIFGGEIINIVDIAFGSIFKFFEVAEDVIGAKVLQDDKFPQLCSWYNNFKNLPVIKENLPDHEKMVAFVKIIREKNMASS* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1847 222 CDD GST_N_Tau 4 77 - -
Vra8g1847 222 SFLD Glutathione Transferase (cytosolic) 1 220 IPR040079 -
Vra8g1847 222 Gene3D Glutaredoxin 1 82 - -
Vra8g1847 222 SFLD Main.3: Omega- and Tau-like 1 220 IPR045073 -
Vra8g1847 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 210 IPR010987 -
Vra8g1847 222 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
Vra8g1847 222 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 216 - -
Vra8g1847 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 216 IPR045073 -
Vra8g1847 222 Pfam Glutathione S-transferase, C-terminal domain 114 195 IPR004046 -
Vra8g1847 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vra8g1847 222 CDD GST_C_Tau 87 214 IPR045074 GO:0004364|GO:0006749
Vra8g1847 222 SUPERFAMILY GST C-terminal domain-like 76 217 IPR036282 -
Vra8g1847 222 Gene3D - 83 222 - -
Vra8g1847 222 SUPERFAMILY Thioredoxin-like 4 103 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1847 Vra-Chr8 35830684 35831606 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1847 4 214 Glutathione S-transferase Gene Family AT3G09270 43.192 1.29e-50 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1847 K00799 - gmx:547584 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1847 8 35830684 35831606 Vra8g1847 8 35830684 35831606 ECH