Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1835 ATGGGGAAGTACATGAAGAAGGCGAAGCCAAAGGGAGAGCTGGCGCTTGTGGAATCCACCACCACCAACGCCACCACCTCCTACATGGGAGTTCGAACCCGCGCCAAAACCCTAGCGCTTCAGAAATCACACCCTCAGCCAGAACTAGCTCCCTCATCCGATTCCTACCTCCAGCTCCGGAGTCGTCGCCTCCAGAAGCCTCCGATTTTGCTGCACTCTCCCAGGCGGAACAAACACCCGAACCCTAAATCTCCAATCACTGAACCTGCCAGGCTCGGACTCGCTTCGGAGCATGACGCTGCGCTCACAGCGCGCAGCCACAAGGAGGAGAGTGCTTTGCATGAGAATGCTGAGGTCCAGGAAGCGTCGTTTGGGGAAAATGTTTTGGATTTTGAAGGTAGAGATAGAACCACTCGAGAATCCACACCTTGCAGTTTGATAAGGGACCCTGATACTGTCAGAACTCCCGGTTCAACTACCAGGCCTACTTGCTCAACTGATGCTAATAGAAGAACCGAGCATGCAAATAGAAGGCAAATCCCAACTTCACGCGAAATGGATGAATTCTTTGCTGAAGTTGAAGAGGCCCAGCAAAGGAAGTTCATTGAGAAGTACAACTTTGATCCTGTGAATGAGAAGCCACTCCCAGGGCGATTTGAATGGGAAAAGTTGAAACCCTAG 681 0.5169 MGKYMKKAKPKGELALVESTTTNATTSYMGVRTRAKTLALQKSHPQPELAPSSDSYLQLRSRRLQKPPILLHSPRRNKHPNPKSPITEPARLGLASEHDAALTARSHKEESALHENAEVQEASFGENVLDFEGRDRTTRESTPCSLIRDPDTVRTPGSTTRPTCSTDANRRTEHANRRQIPTSREMDEFFAEVEEAQQRKFIEKYNFDPVNEKPLPGRFEWEKLKP* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1835 226 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 222 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vra8g1835 226 MobiDBLite consensus disorder prediction 167 185 - -
Vra8g1835 226 MobiDBLite consensus disorder prediction 40 185 - -
Vra8g1835 226 PIRSF CKI_KRP_plant 1 226 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vra8g1835 226 MobiDBLite consensus disorder prediction 128 142 - -
Vra8g1835 226 Gene3D p27 170 226 IPR044898 -
Vra8g1835 226 MobiDBLite consensus disorder prediction 152 166 - -
Vra8g1835 226 MobiDBLite consensus disorder prediction 101 116 - -
Vra8g1835 226 Pfam Cyclin-dependent kinase inhibitor 180 224 IPR003175 GO:0004861|GO:0005634|GO:0051726
Vra8g1835 226 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 1 222 - -
Vra8g1835 226 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1835 Vra-Chr8 35701947 35704696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g1835 1 226 Core Cell Cycle Gene Families AT5G48820 41.897 1.21e-48 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1835 - - pvu:PHAVU_007G133100g 440.269